EnhancerDB
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  3. vista2645[chr1:98408796-98409171]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2645[chr1:98408796-98409171]
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Tissue distribution of vista2645
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Transcription factor that possibly regulate vista2645[chr1:98408796-98409171]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 98408948 98409607 POLR2A UCSC Txn Factor no Conserved 107816353
chr1 98409028 98409254 EP300 UCSC Txn Factor no Conserved 107816356
chr1 98408797 98408812 FOXP1 JASPAR yes 118337558
chr1 98408798 98408813 FOXP1 JASPAR yes 118337559
chr1 98408798 98408819 IRF1 JASPAR yes 118337560
chr1 98408799 98408814 FOXP1 JASPAR yes 118337561
chr1 98408799 98408820 IRF1 JASPAR yes 118337562
chr1 98408800 98408815 FOXP1 JASPAR yes 118337563
chr1 98408800 98408821 IRF1 JASPAR yes 118337564
chr1 98408801 98408816 FOXP1 JASPAR yes 118337565
chr1 98408801 98408822 IRF1 JASPAR yes 118337566
chr1 98408802 98408817 FOXP1 JASPAR yes 118337567
chr1 98408802 98408823 IRF1 JASPAR yes 118337568
chr1 98408803 98408818 FOXP1 JASPAR yes 118337569
chr1 98408803 98408824 IRF1 JASPAR yes 118337570
chr1 98408804 98408819 FOXP1 JASPAR yes 118337571
chr1 98408804 98408825 IRF1 JASPAR yes 118337572
chr1 98408805 98408820 FOXP1 JASPAR yes 118337573
chr1 98408805 98408826 IRF1 JASPAR yes 118337574
chr1 98408806 98408821 FOXP1 JASPAR yes 118337575
chr1 98408806 98408827 IRF1 JASPAR yes 118337576
chr1 98408807 98408822 FOXP1 JASPAR yes 118337577
chr1 98408807 98408828 IRF1 JASPAR yes 118337578
chr1 98408808 98408823 FOXP1 JASPAR yes 118337579
chr1 98408808 98408829 IRF1 JASPAR yes 118337580
chr1 98408809 98408824 FOXP1 JASPAR yes 118337581
chr1 98408812 98408827 STAT2 JASPAR yes 118337582
chr1 98408814 98408835 IRF1 JASPAR yes 118337583
chr1 98408816 98408836 RREB1 JASPAR yes 118337584
chr1 98408817 98408831 ONECUT3 JASPAR yes 118337585
chr1 98408819 98408834 RUNX2 JASPAR yes 118337586
chr1 98408820 98408840 RREB1 JASPAR yes 118337587
chr1 98408847 98408857 TEAD1 JASPAR yes 118337588
chr1 98408862 98408876 POU1F1 JASPAR yes 118337589
chr1 98408863 98408875 POU3F1 JASPAR yes 118337590
chr1 98408863 98408875 POU3F2 JASPAR yes 118337591
chr1 98408863 98408876 POU3F3 JASPAR yes 118337592
chr1 98408864 98408874 NFATC3 JASPAR yes 118337593
chr1 98408870 98408874 YY1 TRANSFAC yes 118337594
chr1 98408879 98408892 POU2F2 JASPAR yes 118337595
chr1 98408881 98408893 POU2F1 JASPAR yes 118337596
chr1 98408896 98408909 POU3F3 JASPAR yes 118337597
chr1 98408897 98408909 POU3F1 JASPAR yes 118337598
chr1 98408897 98408909 POU3F2 JASPAR yes 118337599
chr1 98408904 98408918 IRF7 JASPAR yes 118337600
chr1 98408909 98408913 YY1 TRANSFAC yes 118337601
chr1 98408911 98408923 E2F8 JASPAR yes 118337602
chr1 98408920 98408929 VENTX JASPAR yes 118337603
chr1 98408920 98408930 GSX2 JASPAR yes 118337604
chr1 98408920 98408930 MNX1 JASPAR yes 118337605
chr1 98408921 98408929 BARX1 JASPAR yes 118337606
chr1 98408950 98408954 YY1 TRANSFAC yes 118337607
chr1 98408977 98408988 NFE2L2 JASPAR yes 118337608
chr1 98408991 98409006 AR JASPAR yes 118337609
chr1 98409011 98409025 GLIS2 JASPAR yes 118337610
chr1 98409050 98409054 TEAD2 TRANSFAC yes 118337611
chr1 98409058 98409070 E2F8 JASPAR yes 118337612
chr1 98409074 98409089 NFYB JASPAR yes 118337613
chr1 98409076 98409092 NFYA JASPAR yes 118337614
chr1 98409077 98409095 NFYA JASPAR yes 118337615
chr1 98409081 98409085 H1TF2 TRANSFAC yes 118337616
chr1 98409081 98409085 NFE TRANSFAC yes 118337617
chr1 98409081 98409085 SRF TRANSFAC yes 118337618
chr1 98409106 98409123 ESR1 JASPAR yes 118337619
chr1 98409107 98409121 TLX1 JASPAR yes 118337620
chr1 98409107 98409127 ESR1 JASPAR yes 118337621
chr1 98409108 98409122 TLX1 JASPAR yes 118337622
chr1 98409143 98409158 HSF1 JASPAR yes 118337623
chr1 98409144 98409157 HSF2 JASPAR yes 118337624
chr1 98409147 98409165 IRF2 JASPAR yes 118337625
chr1 98409148 98409169 IRF1 JASPAR yes 118337626
chr1 98409150 98409165 PRDM1 JASPAR yes 118337627
chr1 98409152 98409164 IRF1 JASPAR yes 118337628
chr1 98409152 98409166 IRF7 JASPAR yes 118337629
chr1 98409152 98409166 IRF8 JASPAR yes 118337630
chr1 98409152 98409167 IRF9 JASPAR yes 118337631
SNP sites on vista2645[chr1:98408796-98409171]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 98408888 rs541901017 C T
POU2F1 POU2F2
509410
chr1 98408977 rs147780171 A G
NFE2L2 POLR2A
509411
chr1 98409164 rs60911244 T C
EP300 IRF1 IRF2 IRF7 IRF8 IRF9 POLR2A PRDM1
509412
Genes possibly regulated by vista2645[chr1:98408796-98409171]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 97543299 98386605 - DPYD ENSG00000188641.8 98386605 0.81 0.97 922 77809
Expression level of Genes
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miRNAs possibly regulated by vista2645[chr1:98408796-98409171]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 98510827 98510848 - hsa-miR-2682-3p MIMAT0013518 98515426 0.02168769526844462 0.895146 0.550145 66
Expression level of miRNAs
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