EnhancerDB
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  3. vista2647[chr1:98425688-98426065]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2647[chr1:98425688-98426065]
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Tissue distribution of vista2647
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Transcription factor that possibly regulate vista2647[chr1:98425688-98426065]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 98425688 98425692 TEAD2 TRANSFAC yes 118337669
chr1 98425693 98425703 HOXA13 JASPAR yes 118337670
chr1 98425693 98425703 HOXB13 JASPAR yes 118337671
chr1 98425693 98425703 HOXD13 JASPAR yes 118337672
chr1 98425693 98425704 HOXA10 JASPAR yes 118337673
chr1 98425694 98425703 CDX1 JASPAR yes 118337674
chr1 98425694 98425705 CDX2 JASPAR yes 118337675
chr1 98425720 98425732 HNF1B JASPAR yes 118337676
chr1 98425724 98425728 YY1 TRANSFAC yes 118337677
chr1 98425761 98425767 TBP TRANSFAC yes 118337678
chr1 98425764 98425779 FOXA1 JASPAR yes 118337679
chr1 98425766 98425778 FOXC2 JASPAR yes 118337680
chr1 98425767 98425778 FOXB1 JASPAR yes 118337681
chr1 98425767 98425778 FOXC1 JASPAR yes 118337682
chr1 98425768 98425772 YY1 TRANSFAC yes 118337683
chr1 98425768 98425779 FOXA1 JASPAR yes 118337684
chr1 98425828 98425842 ONECUT1 JASPAR yes 118337685
chr1 98425828 98425842 ONECUT2 JASPAR yes 118337686
chr1 98425828 98425842 ONECUT3 JASPAR yes 118337687
chr1 98425831 98425841 PAX3 JASPAR yes 118337688
chr1 98425831 98425841 PAX7 JASPAR yes 118337689
chr1 98425843 98425850 NKX3-1 JASPAR yes 118337690
chr1 98425843 98425854 FOXB1 JASPAR yes 118337691
chr1 98425849 98425853 TEAD2 TRANSFAC yes 118337692
chr1 98425850 98425858 RHOXF1 JASPAR yes 118337693
chr1 98425855 98425859 H1TF2 TRANSFAC yes 118337694
chr1 98425855 98425859 NFE TRANSFAC yes 118337695
chr1 98425855 98425859 SRF TRANSFAC yes 118337696
chr1 98425857 98425867 NFATC3 JASPAR yes 118337697
chr1 98425865 98425870 NFY TRANSFAC yes 118337698
chr1 98425867 98425873 NFIC JASPAR yes 118337699
chr1 98425903 98425917 POU1F1 JASPAR yes 118337700
chr1 98425904 98425916 POU3F2 JASPAR yes 118337701
chr1 98425905 98425910 GATA2 JASPAR yes 118337702
chr1 98425909 98425924 NFYB JASPAR yes 118337703
chr1 98425916 98425920 H1TF2 TRANSFAC yes 118337704
chr1 98425916 98425920 NFE TRANSFAC yes 118337705
chr1 98425916 98425920 SRF TRANSFAC yes 118337706
chr1 98425924 98425935 DMRT3 JASPAR yes 118337707
chr1 98425938 98425953 SOX21 JASPAR yes 118337708
chr1 98425958 98425973 PRDM1 JASPAR yes 118337709
chr1 98425961 98425982 IRF1 JASPAR yes 118337710
chr1 98425965 98425980 STAT2 JASPAR yes 118337711
chr1 98425966 98425978 IRF1 JASPAR yes 118337712
chr1 98425972 98425984 GRHL1 JASPAR yes 118337713
chr1 98425973 98425983 TFCP2 JASPAR yes 118337714
chr1 98425994 98425997 MYB TRANSFAC yes 118337715
chr1 98426000 98426016 POU4F2 JASPAR yes 118337716
chr1 98426001 98426017 POU4F2 JASPAR yes 118337717
chr1 98426001 98426017 POU4F3 JASPAR yes 118337718
chr1 98426005 98426009 TEAD2 TRANSFAC yes 118337719
chr1 98426005 98426010 TBP TRANSFAC yes 118337720
chr1 98426005 98426011 TFIID TRANSFAC yes 118337721
chr1 98426005 98426019 IRF7 JASPAR yes 118337722
chr1 98426009 98426022 POU2F2 JASPAR yes 118337723
chr1 98426023 98426038 SOX21 JASPAR yes 118337724
chr1 98426041 98426048 PEA3 TRANSFAC yes 118337725
chr1 98426046 98426057 CEBPA JASPAR yes 118337726
chr1 98426047 98426058 CEBPB JASPAR yes 118337727
SNP sites on vista2647[chr1:98425688-98426065]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 98425719 rs190738831 G A no 509462
chr1 98425803 rs146146662 CTT C no 509463
chr1 98425882 rs564626384 G C no 509464
chr1 98425888 rs28641479 A G no 509465
chr1 98425905 rs77259662 A G
GATA2 POU1F1 POU3F2
509466
Genes possibly regulated by vista2647[chr1:98425688-98426065]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 97543299 98386605 - DPYD ENSG00000188641.8 98386605 0.81 0.97 922 60917
Expression level of Genes
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miRNAs possibly regulated by vista2647[chr1:98425688-98426065]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 98510827 98510848 - hsa-miR-2682-3p MIMAT0013518 98515426 0.02588483282831465 0.895146 0.550145 66
Expression level of miRNAs
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