EnhancerDB
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  3. vista26471[chr17:80546229-80546455]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26471[chr17:80546229-80546455]
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Tissue distribution of vista26471
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Transcription factor that possibly regulate vista26471[chr17:80546229-80546455]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 80546255 80546268 TFAP2A JASPAR yes 21322497
chr17 80546255 80546268 TFAP2B JASPAR yes 21322498
chr17 80546255 80546268 TFAP2C JASPAR yes 21322499
chr17 80546255 80546268 TFAP2A JASPAR yes 56375951
chr17 80546255 80546268 TFAP2B JASPAR yes 56375952
chr17 80546255 80546268 TFAP2C JASPAR yes 56375953
chr17 80546259 80546265 MAZ TRANSFAC yes 21322500
chr17 80546259 80546265 MAZ TRANSFAC yes 56375954
chr17 80546263 80546281 NFYA JASPAR yes 21322501
chr17 80546263 80546281 NFYA JASPAR yes 56375955
chr17 80546271 80546276 NFY TRANSFAC yes 21322502
chr17 80546271 80546276 NFY TRANSFAC yes 56375956
chr17 80546278 80546282 LFA1 TRANSFAC yes 21322503
chr17 80546278 80546282 LFA1 TRANSFAC yes 56375957
chr17 80546282 80546287 SP1 TRANSFAC yes 21322504
chr17 80546282 80546287 SP1 TRANSFAC yes 56375958
chr17 80546308 80546312 LFA1 TRANSFAC yes 21322505
chr17 80546308 80546312 LFA1 TRANSFAC yes 56375959
chr17 80546312 80546317 SP1 TRANSFAC yes 21322506
chr17 80546312 80546317 SP1 TRANSFAC yes 56375960
chr17 80546320 80546340 RREB1 JASPAR yes 21322507
chr17 80546320 80546340 RREB1 JASPAR yes 56375961
chr17 80546335 80546355 RREB1 JASPAR yes 21322508
chr17 80546335 80546355 RREB1 JASPAR yes 56375962
chr17 80546343 80546358 NR2C2 JASPAR yes 21322509
chr17 80546343 80546358 NR2C2 JASPAR yes 56375963
chr17 80546353 80546357 LFA1 TRANSFAC yes 21322510
chr17 80546353 80546357 LFA1 TRANSFAC yes 56375964
chr17 80546357 80546362 SP1 TRANSFAC yes 21322511
chr17 80546357 80546362 SP1 TRANSFAC yes 56375965
chr17 80546358 80546373 NR2C2 JASPAR yes 21322512
chr17 80546358 80546373 NR2C2 JASPAR yes 56375966
chr17 80546368 80546372 LFA1 TRANSFAC yes 21322513
chr17 80546368 80546372 LFA1 TRANSFAC yes 56375967
chr17 80546372 80546377 SP1 TRANSFAC yes 21322514
chr17 80546372 80546377 SP1 TRANSFAC yes 56375968
chr17 80546386 80546404 ESR1 JASPAR yes 21322515
chr17 80546386 80546404 ESR1 JASPAR yes 56375969
chr17 80546390 80546401 FOSL1 JASPAR yes 21322516
chr17 80546390 80546401 FOSL1 JASPAR yes 56375970
chr17 80546391 80546402 FOSL2 JASPAR yes 21322517
chr17 80546391 80546402 JUNB JASPAR yes 21322518
chr17 80546391 80546402 FOSL2 JASPAR yes 56375971
chr17 80546391 80546402 JUNB JASPAR yes 56375972
chr17 80546391 80546405 JUN JASPAR yes 21322519
chr17 80546391 80546405 JUN JASPAR yes 56375973
chr17 80546443 80546455 TGIF2 JASPAR yes 21322520
chr17 80546443 80546455 TGIF2 JASPAR yes 56375974
chr17 80546447 80546465 ESR2 JASPAR yes 21322521
chr17 80546447 80546465 ESR2 JASPAR yes 56375975
chr17 80546449 80546469 ESR1 JASPAR yes 21322522
chr17 80546449 80546469 ESR1 JASPAR yes 56375976
chr17 80546454 80546469 HSF1 JASPAR yes 21322523
chr17 80546454 80546469 HSF1 JASPAR yes 56375977
SNP sites on vista26471[chr17:80546229-80546455]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 80546260 rs35663335 G A
MAZ TFAP2A TFAP2B TFAP2C
5123324
chr17 80546302 rs8073994 T A,G no 5123325
chr17 80546313 rs201466074 AGGCGGTTGGAGGGCT A
SP1
5123326
chr17 80546313 rs56187474 AGGCGGTTGGAGGGCT A
SP1
5123327
chr17 80546331 rs572423720 C T
RREB1
5123328
chr17 80546349 rs116790725 T C
NR2C2 RREB1
5123329
chr17 80546373 rs201426500 A T
NR2C2 SP1
5123330
chr17 80546376 rs144665282 C T
SP1
5123331
chr17 80546377 rs114778464 G A
SP1
5123332
chr17 80546400 rs35748473 C A,T
ESR1 FOSL1 FOSL2 JUN JUNB
5123333
Genes possibly regulated by vista26471[chr17:80546229-80546455]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 80477589 80602538 + FOXK2 ENSG00000141568.15 80477589 0.62 1.0 16399 31360
chr17 80572438 80606429 - WDR45B ENSG00000141580.11 80606429 0.61 1.0 16400 40026
Expression level of Genes
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miRNAs possibly regulated by vista26471[chr17:80546229-80546455]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results