EnhancerDB
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  3. vista2649[chr1:98459458-98459857]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2649[chr1:98459458-98459857]
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Tissue distribution of vista2649
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Transcription factor that possibly regulate vista2649[chr1:98459458-98459857]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 98459468 98459472 YY1 TRANSFAC yes 118337760
chr1 98459471 98459480 SRY JASPAR yes 118337761
chr1 98459473 98459476 MYB TRANSFAC yes 118337762
chr1 98459483 98459493 NFATC3 JASPAR yes 118337763
chr1 98459483 98459494 FOXB1 JASPAR yes 118337764
chr1 98459483 98459494 FOXC1 JASPAR yes 118337765
chr1 98459485 98459493 FOXO3 JASPAR yes 118337766
chr1 98459488 98459500 BHLHE23 JASPAR yes 118337767
chr1 98459489 98459499 NEUROG2 JASPAR yes 118337768
chr1 98459491 98459502 NFE2 JASPAR yes 118337769
chr1 98459492 98459501 JDP2 JASPAR yes 118337770
chr1 98459503 98459513 HMBOX1 JASPAR yes 118337771
chr1 98459530 98459541 DMRT3 JASPAR yes 118337772
chr1 98459539 98459555 SOX4 JASPAR yes 118337773
chr1 98459540 98459555 MEF2C JASPAR yes 118337774
chr1 98459540 98459555 SOX21 JASPAR yes 118337775
chr1 98459543 98459547 YY1 TRANSFAC yes 118337776
chr1 98459561 98459567 MYC TRANSFAC yes 118337777
chr1 98459564 98459574 ALX3 JASPAR yes 118337778
chr1 98459564 98459574 GSX1 JASPAR yes 118337779
chr1 98459564 98459574 GSX2 JASPAR yes 118337780
chr1 98459564 98459574 MIXL1 JASPAR yes 118337781
chr1 98459564 98459574 MNX1 JASPAR yes 118337782
chr1 98459564 98459574 NOTO JASPAR yes 118337783
chr1 98459565 98459573 ISX JASPAR yes 118337784
chr1 98459565 98459573 LMX1A JASPAR yes 118337785
chr1 98459565 98459573 LMX1B JASPAR yes 118337786
chr1 98459565 98459573 NKX6-1 JASPAR yes 118337787
chr1 98459565 98459573 NKX6-2 JASPAR yes 118337788
chr1 98459565 98459573 PRRX1 JASPAR yes 118337789
chr1 98459565 98459573 RAX2 JASPAR yes 118337790
chr1 98459565 98459573 SHOX JASPAR yes 118337791
chr1 98459565 98459573 UNCX JASPAR yes 118337792
chr1 98459565 98459573 VAX1 JASPAR yes 118337793
chr1 98459583 98459586 MYB TRANSFAC yes 118337794
chr1 98459589 98459600 STAT3 JASPAR yes 118337795
chr1 98459593 98459601 FEV JASPAR yes 118337796
chr1 98459597 98459608 DUX4 JASPAR yes 118337797
chr1 98459597 98459608 PHOX2A JASPAR yes 118337798
chr1 98459597 98459608 PROP1 JASPAR yes 118337799
chr1 98459602 98459615 POU3F3 JASPAR yes 118337800
chr1 98459609 98459623 POU4F1 JASPAR yes 118337801
chr1 98459616 98459627 DMRT3 JASPAR yes 118337802
chr1 98459631 98459634 MYB TRANSFAC yes 118337803
chr1 98459649 98459661 IRF1 JASPAR yes 118337804
chr1 98459651 98459657 TCF4 TRANSFAC yes 118337805
chr1 98459662 98459667 GATA2 JASPAR yes 118337806
chr1 98459675 98459682 JUN TRANSFAC yes 118337807
chr1 98459694 98459699 GATA2 JASPAR yes 118337808
chr1 98459731 98459737 MZF1 JASPAR yes 118337809
chr1 98459748 98459758 HOXB2 JASPAR yes 118337810
chr1 98459748 98459758 HOXB3 JASPAR yes 118337811
chr1 98459748 98459758 MNX1 JASPAR yes 118337812
chr1 98459749 98459757 LBX1 JASPAR yes 118337813
chr1 98459749 98459757 PDX1 JASPAR yes 118337814
chr1 98459749 98459757 VAX1 JASPAR yes 118337815
chr1 98459749 98459757 VAX2 JASPAR yes 118337816
chr1 98459749 98459757 VSX1 JASPAR yes 118337817
chr1 98459749 98459757 VSX2 JASPAR yes 118337818
chr1 98459749 98459759 POU6F2 JASPAR yes 118337819
chr1 98459749 98459762 DUXA JASPAR yes 118337820
chr1 98459750 98459761 PHOX2A JASPAR yes 118337821
chr1 98459750 98459761 PROP1 JASPAR yes 118337822
chr1 98459768 98459774 MYC TRANSFAC yes 118337823
chr1 98459773 98459779 TBP TRANSFAC yes 118337824
chr1 98459813 98459834 IRF1 JASPAR yes 118337825
chr1 98459816 98459820 YY1 TRANSFAC yes 118337826
chr1 98459819 98459840 IRF1 JASPAR yes 118337827
chr1 98459820 98459835 FOXP1 JASPAR yes 118337828
chr1 98459821 98459836 STAT2 JASPAR yes 118337829
chr1 98459824 98459845 IRF1 JASPAR yes 118337830
chr1 98459825 98459840 FOXP1 JASPAR yes 118337831
chr1 98459826 98459841 STAT2 JASPAR yes 118337832
chr1 98459829 98459850 IRF1 JASPAR yes 118337833
chr1 98459830 98459845 FOXP1 JASPAR yes 118337834
chr1 98459830 98459851 IRF1 JASPAR yes 118337835
chr1 98459831 98459846 STAT2 JASPAR yes 118337836
chr1 98459834 98459855 IRF1 JASPAR yes 118337837
chr1 98459835 98459850 FOXP1 JASPAR yes 118337838
chr1 98459835 98459856 IRF1 JASPAR yes 118337839
chr1 98459840 98459855 FOXP1 JASPAR yes 118337840
chr1 98459841 98459856 STAT2 JASPAR yes 118337841
SNP sites on vista2649[chr1:98459458-98459857]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 98459553 rs7549905 G A,T
MEF2C SOX21 SOX4
509512
chr1 98459775 rs143260159 A T
TBP
509513
chr1 98459820 rs113911571 T TTTTTC
FOXP1 IRF1 YY1
509514
chr1 98459820 rs566717306 TTTTTC T
FOXP1 IRF1 YY1
509515
Genes possibly regulated by vista2649[chr1:98459458-98459857]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 97543299 98386605 - DPYD ENSG00000188641.8 98386605 0.81 0.97 922 27147
Expression level of Genes
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miRNAs possibly regulated by vista2649[chr1:98459458-98459857]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 98510827 98510848 - hsa-miR-2682-3p MIMAT0013518 98515426 0.04222614675898672 0.895146 0.550145 66
Expression level of miRNAs
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