EnhancerDB
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  3. vista2650[chr1:98479796-98480152]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2650[chr1:98479796-98480152]
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Tissue distribution of vista2650
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Transcription factor that possibly regulate vista2650[chr1:98479796-98480152]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 98479807 98479823 SOX8 JASPAR yes 118337842
chr1 98479815 98479827 FOXI1 JASPAR yes 118337843
chr1 98479818 98479822 YY1 TRANSFAC yes 118337844
chr1 98479848 98479861 DUXA JASPAR yes 118337845
chr1 98479849 98479860 DUX4 JASPAR yes 118337846
chr1 98479851 98479866 HNF1A JASPAR yes 118337847
chr1 98479852 98479864 HNF1B JASPAR yes 118337848
chr1 98479852 98479865 HNF1B JASPAR yes 118337849
chr1 98479855 98479870 FOXP1 JASPAR yes 118337850
chr1 98479856 98479871 FOXA1 JASPAR yes 118337851
chr1 98479857 98479868 FOXB1 JASPAR yes 118337852
chr1 98479857 98479868 FOXC1 JASPAR yes 118337853
chr1 98479857 98479869 FOXC2 JASPAR yes 118337854
chr1 98479873 98479879 SOX10 JASPAR yes 118337855
chr1 98479876 98479887 TBX20 JASPAR yes 118337856
chr1 98479888 98479898 GCM2 JASPAR yes 118337857
chr1 98479888 98479899 GCM1 JASPAR yes 118337858
chr1 98479916 98479925 THAP1 JASPAR yes 118337859
chr1 98479966 98479970 YY1 TRANSFAC yes 118337860
chr1 98479989 98479993 YY1 TRANSFAC yes 118337861
chr1 98479989 98480000 FOXB1 JASPAR yes 118337862
chr1 98479994 98480007 ZBTB18 JASPAR yes 118337863
chr1 98480002 98480007 GATA2 JASPAR yes 118337864
chr1 98480002 98480014 FOXI1 JASPAR yes 118337865
chr1 98480005 98480009 YY1 TRANSFAC yes 118337866
chr1 98480011 98480026 FOXP1 JASPAR yes 118337867
chr1 98480012 98480025 POU2F2 JASPAR yes 118337868
chr1 98480013 98480030 BCL6B JASPAR yes 118337869
chr1 98480029 98480039 RELA JASPAR yes 118337870
chr1 98480103 98480124 IRF1 JASPAR yes 118337871
chr1 98480108 98480120 IRF1 JASPAR yes 118337872
chr1 98480115 98480128 ZBTB18 JASPAR yes 118337873
chr1 98480116 98480128 NHLH1 JASPAR yes 118337874
chr1 98480117 98480127 MSC JASPAR yes 118337875
chr1 98480117 98480127 MYF6 JASPAR yes 118337876
chr1 98480117 98480127 NHLH1 JASPAR yes 118337877
chr1 98480117 98480127 TFAP4 JASPAR yes 118337878
chr1 98480117 98480129 TAL1 JASPAR yes 118337879
chr1 98480126 98480133 SPIB JASPAR yes 118337880
SNP sites on vista2650[chr1:98479796-98480152]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 98479835 rs17117405 C T no 509686
chr1 98479859 rs577706854 C G
DUX4 DUXA FOXA1 FOXB1 FOXC1 FOXC2 FOXP1 HNF1A HNF1B
509687
chr1 98480118 rs140937880 A G
IRF1 MSC MYF6 NHLH1 TAL1 TFAP4 ZBTB18
509688
chr1 98480128 rs1938567 T C
NHLH1 SPIB TAL1 ZBTB18
509689
Genes possibly regulated by vista2650[chr1:98479796-98480152]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 97543299 98386605 - DPYD ENSG00000188641.8 98386605 0.81 0.97 922 6809
Expression level of Genes
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miRNAs possibly regulated by vista2650[chr1:98479796-98480152]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 98510827 98510848 - hsa-miR-2682-3p MIMAT0013518 98515426 0.06807260676357611 0.895146 0.550145 66
Expression level of miRNAs
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