EnhancerDB
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  3. vista26500[chr17:81023754-81023954]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26500[chr17:81023754-81023954]
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Tissue distribution of vista26500
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Transcription factor that possibly regulate vista26500[chr17:81023754-81023954]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 81023755 81023759 NFE TRANSFAC yes 21323905
chr17 81023755 81023759 NFE TRANSFAC yes 56397615
chr17 81023760 81023770 ZNF740 JASPAR yes 21323906
chr17 81023760 81023770 ZNF740 JASPAR yes 56397616
chr17 81023760 81023774 GLIS2 JASPAR yes 21323907
chr17 81023760 81023774 GLIS3 JASPAR yes 21323908
chr17 81023760 81023774 GLIS2 JASPAR yes 56397617
chr17 81023760 81023774 GLIS3 JASPAR yes 56397618
chr17 81023762 81023772 ZNF740 JASPAR yes 21323909
chr17 81023762 81023772 ZNF740 JASPAR yes 56397619
chr17 81023782 81023788 MZF1 JASPAR yes 21323910
chr17 81023782 81023788 MZF1 JASPAR yes 56397620
chr17 81023807 81023811 NFE TRANSFAC yes 21323911
chr17 81023807 81023811 NFE TRANSFAC yes 56397621
chr17 81023807 81023812 GATA1 TRANSFAC yes 21323912
chr17 81023807 81023812 GATA1 TRANSFAC yes 56397622
chr17 81023807 81023813 GATA3 JASPAR yes 21323913
chr17 81023807 81023813 GATA3 JASPAR yes 56397623
chr17 81023828 81023847 PAX5 JASPAR yes 21323914
chr17 81023828 81023847 PAX5 JASPAR yes 56397624
chr17 81023846 81023850 H1TF2 TRANSFAC yes 21323915
chr17 81023846 81023850 NFE TRANSFAC yes 21323916
chr17 81023846 81023850 SRF TRANSFAC yes 21323917
chr17 81023846 81023850 H1TF2 TRANSFAC yes 56397625
chr17 81023846 81023850 NFE TRANSFAC yes 56397626
chr17 81023846 81023850 SRF TRANSFAC yes 56397627
chr17 81023875 81023885 MZF1 JASPAR yes 21323918
chr17 81023875 81023885 MZF1 JASPAR yes 56397628
chr17 81023878 81023884 SP1 TRANSFAC yes 21323919
chr17 81023878 81023884 SP1 TRANSFAC yes 56397629
chr17 81023881 81023896 TFAP2C JASPAR yes 21323920
chr17 81023881 81023896 TFAP2C JASPAR yes 56397630
chr17 81023882 81023893 EBF1 JASPAR yes 21323921
chr17 81023882 81023893 EBF1 JASPAR yes 56397631
chr17 81023894 81023899 SP1 TRANSFAC yes 21323922
chr17 81023894 81023899 SP1 TRANSFAC yes 56397632
chr17 81023896 81023913 NR3C2 JASPAR yes 21323923
chr17 81023896 81023913 NR3C2 JASPAR yes 56397633
chr17 81023917 81023927 HESX1 JASPAR yes 21323924
chr17 81023917 81023927 LBX2 JASPAR yes 21323925
chr17 81023917 81023927 MIXL1 JASPAR yes 21323926
chr17 81023917 81023927 RAX JASPAR yes 21323927
chr17 81023917 81023927 HESX1 JASPAR yes 56397634
chr17 81023917 81023927 LBX2 JASPAR yes 56397635
chr17 81023917 81023927 MIXL1 JASPAR yes 56397636
chr17 81023917 81023927 RAX JASPAR yes 56397637
chr17 81023918 81023926 LHX9 JASPAR yes 21323928
chr17 81023918 81023926 SHOX JASPAR yes 21323929
chr17 81023918 81023926 LHX9 JASPAR yes 56397638
chr17 81023918 81023926 SHOX JASPAR yes 56397639
chr17 81023918 81023927 VENTX JASPAR yes 21323930
chr17 81023918 81023927 VENTX JASPAR yes 56397640
chr17 81023937 81023955 ESR1 JASPAR yes 21323931
chr17 81023937 81023955 ESR1 JASPAR yes 56397641
SNP sites on vista26500[chr17:81023754-81023954]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 81023763 rs547315940 C T
GLIS2 GLIS3 ZNF740
5127194
chr17 81023780 rs571836757 C T no 5127195
chr17 81023781 rs11869659 G A no 5127196
chr17 81023892 rs72851979 G C
EBF1 TFAP2C
5127197
Genes possibly regulated by vista26500[chr17:81023754-81023954]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 80900031 81009686 - B3GNTL1 ENSG00000175711.4 81009686 0.74 1.0 16406 85932
chr17 81037567 81052864 + METRNL ENSG00000176845.8 81037567 0.77 1.0 16407 86387
Expression level of Genes
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miRNAs possibly regulated by vista26500[chr17:81023754-81023954]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results