EnhancerDB
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  3. vista26519[chr18:106616-106942]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26519[chr18:106616-106942]
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Tissue distribution of vista26519
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Transcription factor that possibly regulate vista26519[chr18:106616-106942]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 106620 106640 ESR1 JASPAR yes 42665828
chr18 106624 106642 ESR2 JASPAR yes 42665829
chr18 106625 106640 ESR2 JASPAR yes 42665830
chr18 106626 106630 LFA1 TRANSFAC yes 42665831
chr18 106644 106657 DUXA JASPAR yes 42665832
chr18 106657 106672 JUND JASPAR yes 42665833
chr18 106658 106671 JUN JASPAR yes 42665834
chr18 106659 106672 ATF4 JASPAR yes 42665835
chr18 106660 106672 DBP JASPAR yes 42665836
chr18 106660 106672 HLF JASPAR yes 42665837
chr18 106662 106673 NFIL3 JASPAR yes 42665838
chr18 106667 106670 MYB TRANSFAC yes 42665839
chr18 106674 106684 SMAD3 JASPAR yes 42665840
chr18 106692 106710 ESR2 JASPAR yes 42665841
chr18 106693 106708 ESR2 JASPAR yes 42665842
chr18 106697 106703 SOX10 JASPAR yes 42665843
chr18 106757 106767 GCM2 JASPAR yes 42665844
chr18 106758 106778 PPARG JASPAR yes 42665845
chr18 106759 106777 ESR2 JASPAR yes 42665846
chr18 106760 106777 ESR1 JASPAR yes 42665847
chr18 106760 106778 ESR1 JASPAR yes 42665848
chr18 106760 106778 ESR2 JASPAR yes 42665849
chr18 106761 106776 ESR2 JASPAR yes 42665850
chr18 106761 106781 ESR1 JASPAR yes 42665851
chr18 106762 106766 LFA1 TRANSFAC yes 42665852
chr18 106793 106808 JUND JASPAR yes 42665853
chr18 106794 106807 JUN JASPAR yes 42665854
chr18 106795 106808 ATF4 JASPAR yes 42665855
chr18 106796 106808 DBP JASPAR yes 42665856
chr18 106796 106808 HLF JASPAR yes 42665857
chr18 106796 106808 JDP2 JASPAR yes 42665858
chr18 106796 106808 TEF JASPAR yes 42665859
chr18 106798 106809 NFIL3 JASPAR yes 42665860
chr18 106803 106806 MYB TRANSFAC yes 42665861
chr18 106825 106835 GCM2 JASPAR yes 42665862
chr18 106826 106846 PPARG JASPAR yes 42665863
chr18 106827 106845 ESR2 JASPAR yes 42665864
chr18 106828 106845 ESR1 JASPAR yes 42665865
chr18 106828 106846 ESR1 JASPAR yes 42665866
chr18 106828 106846 ESR2 JASPAR yes 42665867
chr18 106829 106844 ESR2 JASPAR yes 42665868
chr18 106829 106849 ESR1 JASPAR yes 42665869
chr18 106830 106834 LFA1 TRANSFAC yes 42665870
chr18 106843 106847 YY1 TRANSFAC yes 42665871
chr18 106859 106870 EBF1 JASPAR yes 42665872
chr18 106878 106888 SMAD3 JASPAR yes 42665873
chr18 106891 106903 INSM1 JASPAR yes 42665874
chr18 106896 106914 ESR2 JASPAR yes 42665875
chr18 106897 106912 ESR2 JASPAR yes 42665876
chr18 106901 106907 SOX10 JASPAR yes 42665877
chr18 106928 106938 SREBF2 JASPAR yes 42665878
SNP sites on vista26519[chr18:106616-106942]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 106671 rs201783016 C G
ATF4 DBP HLF JUN JUND NFIL3
5129052
chr18 106750 rs549353784 G A no 5129053
chr18 106827 rs534441076 A C,G
ESR2 GCM2 PPARG
5129054
chr18 106828 rs552634766 T C
ESR1 ESR2 GCM2 PPARG
5129055
chr18 106829 rs570976059 G A
ESR1 ESR2 GCM2 PPARG
5129056
Genes possibly regulated by vista26519[chr18:106616-106942]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 47225 73545 - RP11-683L23.1 ENSG00000173213.7 73545 0.9 0.99 16408 66929
chr18 158383 214629 + USP14 ENSG00000101557.10 158383 0.79 0.99 16409 48559
Expression level of Genes
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miRNAs possibly regulated by vista26519[chr18:106616-106942]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results