EnhancerDB
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  3. vista26532[chr18:395466-395650]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26532[chr18:395466-395650]
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Tissue distribution of vista26532
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Transcription factor that possibly regulate vista26532[chr18:395466-395650]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 395459 395475 SOX4 JASPAR yes 42666411
chr18 395459 395475 SOX4 JASPAR yes 108587700
chr18 395483 395489 YY1 JASPAR yes 42666412
chr18 395483 395489 YY1 JASPAR yes 108587701
chr18 395510 395515 GATA2 JASPAR yes 42666413
chr18 395510 395515 GATA2 JASPAR yes 108587702
chr18 395515 395523 OTX2 JASPAR yes 42666414
chr18 395515 395523 OTX2 JASPAR yes 108587703
chr18 395519 395534 STAT1 JASPAR yes 42666415
chr18 395519 395534 STAT1 JASPAR yes 108587704
chr18 395521 395532 STAT1 JASPAR yes 42666416
chr18 395521 395532 STAT3 JASPAR yes 42666417
chr18 395521 395532 STAT1 JASPAR yes 108587705
chr18 395521 395532 STAT3 JASPAR yes 108587706
chr18 395537 395555 RARA JASPAR yes 42666418
chr18 395537 395555 RARA JASPAR yes 108587707
chr18 395538 395552 RXRB JASPAR yes 42666419
chr18 395538 395552 RXRG JASPAR yes 42666420
chr18 395538 395552 RXRB JASPAR yes 108587708
chr18 395538 395552 RXRG JASPAR yes 108587709
chr18 395546 395563 RARA JASPAR yes 42666421
chr18 395546 395563 RXRA JASPAR yes 42666422
chr18 395546 395563 RARA JASPAR yes 108587710
chr18 395546 395563 RXRA JASPAR yes 108587711
chr18 395570 395580 TEAD1 JASPAR yes 42666423
chr18 395570 395580 TEAD4 JASPAR yes 42666424
chr18 395570 395580 TEAD1 JASPAR yes 108587712
chr18 395570 395580 TEAD4 JASPAR yes 108587713
chr18 395571 395579 TEAD3 JASPAR yes 42666425
chr18 395571 395579 TEAD3 JASPAR yes 108587714
chr18 395578 395596 NR3C1 JASPAR yes 42666426
chr18 395578 395596 NR3C1 JASPAR yes 108587715
chr18 395594 395599 TFAP2A TRANSFAC yes 42666427
chr18 395594 395599 TFAP2A TRANSFAC yes 108587716
chr18 395594 395600 MZF1 JASPAR yes 42666428
chr18 395594 395600 MZF1 JASPAR yes 108587717
chr18 395596 395606 NFKB1 JASPAR yes 42666429
chr18 395596 395606 NFKB1 JASPAR yes 108587718
chr18 395598 395609 BATF JASPAR yes 42666430
chr18 395598 395609 BATF JASPAR yes 108587719
chr18 395600 395611 FOSL1 JASPAR yes 42666431
chr18 395600 395611 JUND JASPAR yes 42666432
chr18 395600 395611 FOSL1 JASPAR yes 108587720
chr18 395600 395611 JUND JASPAR yes 108587721
chr18 395601 395612 JUNB JASPAR yes 42666433
chr18 395601 395612 JUNB JASPAR yes 108587722
chr18 395603 395611 FOXC1 JASPAR yes 42666434
chr18 395603 395611 FOXC1 JASPAR yes 108587723
chr18 395617 395628 NFIL3 JASPAR yes 42666435
chr18 395617 395628 NFIL3 JASPAR yes 108587724
chr18 395620 395624 TEAD2 TRANSFAC yes 42666436
chr18 395620 395624 TEAD2 TRANSFAC yes 108587725
SNP sites on vista26532[chr18:395466-395650]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 395571 rs549271713 T C
TEAD1 TEAD3 TEAD4
5130385
chr18 395635 rs368254225 C T no 5130386
chr18 395646 rs115274594 A G no 5130387
chr18 395650 rs7236696 G A,T no 5130388
Genes possibly regulated by vista26532[chr18:395466-395650]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista26532[chr18:395466-395650]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results