EnhancerDB
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  3. vista26534[chr18:410446-410458]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26534[chr18:410446-410458]
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Tissue distribution of vista26534
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Transcription factor that possibly regulate vista26534[chr18:410446-410458]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 410430 410451 IRF1 JASPAR yes 42666468
chr18 410430 410451 IRF1 JASPAR yes 108589671
chr18 410433 410447 SPI1 JASPAR yes 42666469
chr18 410433 410447 SPI1 JASPAR yes 108589672
chr18 410433 410454 IRF1 JASPAR yes 42666470
chr18 410433 410454 IRF1 JASPAR yes 108589673
chr18 410436 410450 SPI1 JASPAR yes 42666471
chr18 410436 410450 SPI1 JASPAR yes 108589674
chr18 410436 410457 IRF1 JASPAR yes 42666472
chr18 410436 410457 IRF1 JASPAR yes 108589675
chr18 410439 410454 FOXP1 JASPAR yes 42666473
chr18 410439 410454 FOXP1 JASPAR yes 108589676
chr18 410441 410456 FOXP1 JASPAR yes 42666474
chr18 410441 410456 FOXP1 JASPAR yes 108589677
chr18 410442 410457 FOXP1 JASPAR yes 42666475
chr18 410442 410457 FOXP1 JASPAR yes 108589678
chr18 410443 410458 FOXP1 JASPAR yes 42666476
chr18 410443 410458 FOXP1 JASPAR yes 108589679
chr18 410444 410459 FOXP1 JASPAR yes 42666477
chr18 410444 410459 FOXP1 JASPAR yes 108589680
SNP sites on vista26534[chr18:410446-410458]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista26534[chr18:410446-410458]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 319361 500722 - COLEC12 ENSG00000158270.10 500722 0.9 1.0 16411 9736
Expression level of Genes
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miRNAs possibly regulated by vista26534[chr18:410446-410458]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results