EnhancerDB
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  3. vista26536[chr18:550761-551103]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26536[chr18:550761-551103]
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Tissue distribution of vista26536
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Transcription factor that possibly regulate vista26536[chr18:550761-551103]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 550761 550776 FOXP1 JASPAR yes 42666525
chr18 550762 550783 IRF1 JASPAR yes 42666526
chr18 550766 550781 FOXP1 JASPAR yes 42666527
chr18 550766 550787 IRF1 JASPAR yes 42666528
chr18 550767 550788 IRF1 JASPAR yes 42666529
chr18 550768 550783 FOXP1 JASPAR yes 42666530
chr18 550768 550783 LEF1 JASPAR yes 42666531
chr18 550768 550789 IRF1 JASPAR yes 42666532
chr18 550769 550790 IRF1 JASPAR yes 42666533
chr18 550773 550788 FOXP1 JASPAR yes 42666534
chr18 550773 550794 IRF1 JASPAR yes 42666535
chr18 550774 550789 FOXP1 JASPAR yes 42666536
chr18 550774 550795 IRF1 JASPAR yes 42666537
chr18 550775 550790 FOXP1 JASPAR yes 42666538
chr18 550776 550791 FOXP1 JASPAR yes 42666539
chr18 550777 550792 FOXP1 JASPAR yes 42666540
chr18 550777 550798 IRF1 JASPAR yes 42666541
chr18 550778 550793 FOXP1 JASPAR yes 42666542
chr18 550780 550795 FOXP1 JASPAR yes 42666543
chr18 550789 550802 ZBTB18 JASPAR yes 42666544
chr18 550807 550818 NFKB1 JASPAR yes 42666545
chr18 550808 550818 RELA JASPAR yes 42666546
chr18 550808 550818 REL JASPAR yes 42666547
chr18 550811 550825 PAX6 JASPAR yes 42666548
chr18 550832 550844 PBX1 JASPAR yes 42666549
chr18 550868 550886 SRF JASPAR yes 42666550
chr18 550869 550873 NFE TRANSFAC yes 42666551
chr18 550869 550874 GATA1 TRANSFAC yes 42666552
chr18 550869 550875 GATA3 JASPAR yes 42666553
chr18 550870 550881 FOXB1 JASPAR yes 42666554
chr18 550870 550881 FOXC1 JASPAR yes 42666555
chr18 550873 550885 SRF JASPAR yes 42666556
chr18 550917 550932 FOXP1 JASPAR yes 42666557
chr18 550920 550931 FOXP2 JASPAR yes 42666558
chr18 550921 550929 FOXO3 JASPAR yes 42666559
chr18 550931 550951 TP53 JASPAR yes 42666560
chr18 550948 550952 H1TF2 TRANSFAC yes 42666561
chr18 550948 550952 NFE TRANSFAC yes 42666562
chr18 550948 550952 SRF TRANSFAC yes 42666563
chr18 550955 550958 MYB TRANSFAC yes 42666564
chr18 550973 550982 POU3F4 JASPAR yes 42666565
chr18 550974 550982 FOXL1 JASPAR yes 42666566
chr18 551022 551032 EMX1 JASPAR yes 42666567
chr18 551022 551032 EVX1 JASPAR yes 42666568
chr18 551022 551032 EVX2 JASPAR yes 42666569
chr18 551022 551032 HOXA2 JASPAR yes 42666570
chr18 551022 551032 HOXB2 JASPAR yes 42666571
chr18 551022 551032 HOXB3 JASPAR yes 42666572
chr18 551022 551032 NOTO JASPAR yes 42666573
chr18 551023 551033 POU6F2 JASPAR yes 42666574
chr18 551030 551041 CEBPA JASPAR yes 42666575
chr18 551058 551068 EMX1 JASPAR yes 42666576
chr18 551058 551068 EVX1 JASPAR yes 42666577
chr18 551058 551068 EVX2 JASPAR yes 42666578
chr18 551058 551068 HOXA2 JASPAR yes 42666579
chr18 551058 551068 MEOX1 JASPAR yes 42666580
chr18 551058 551068 MEOX2 JASPAR yes 42666581
chr18 551064 551068 YY1 TRANSFAC yes 42666582
chr18 551076 551086 SMAD3 JASPAR yes 42666583
SNP sites on vista26536[chr18:550761-551103]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 550772 rs3016822 G A
FOXP1 IRF1 LEF1
5132142
chr18 550971 rs76382040 C G,T no 5132143
Genes possibly regulated by vista26536[chr18:550761-551103]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 319361 500722 - COLEC12 ENSG00000158270.10 500722 0.9 1.0 16411 49961
chr18 580367 581524 + CETN1 ENSG00000177143.3 580367 0.96 1.0 16412 70736
chr18 596988 650334 + CLUL1 ENSG00000079101.12 596988 0.94 0.98 16413 54115
Expression level of Genes
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miRNAs possibly regulated by vista26536[chr18:550761-551103]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results