EnhancerDB
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  3. vista26537[chr18:666183-666708]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26537[chr18:666183-666708]
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Tissue distribution of vista26537
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Transcription factor that possibly regulate vista26537[chr18:666183-666708]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 666145 666565 CTCF UCSC Txn Factor no Conserved 108315049
chr18 666240 666500 RAD21 UCSC Txn Factor no Conserved 108315089
chr18 666188 666198 NFIA JASPAR yes 42666584
chr18 666189 666198 NFIX JASPAR yes 42666585
chr18 666190 666196 NFIC JASPAR yes 42666586
chr18 666195 666205 NFATC3 JASPAR yes 42666587
chr18 666218 666224 GATA3 JASPAR yes 42666588
chr18 666230 666250 RREB1 JASPAR yes 42666589
chr18 666245 666250 TFAP2A TRANSFAC yes 42666590
chr18 666245 666251 MZF1 JASPAR yes 42666591
chr18 666246 666256 SP1 JASPAR yes 42666592
chr18 666246 666263 RARA JASPAR yes 42666593
chr18 666253 666258 ETS2 TRANSFAC yes 42666594
chr18 666257 666274 RARA JASPAR yes 42666595
chr18 666265 666270 SP1 TRANSFAC yes 42666596
chr18 666270 666290 ESR1 JASPAR yes 42666597
chr18 666273 666291 ESR2 JASPAR yes 42666598
chr18 666273 666291 NR3C1 JASPAR yes 42666599
chr18 666274 666289 AR JASPAR yes 42666600
chr18 666274 666291 NR3C1 JASPAR yes 42666601
chr18 666274 666291 NR3C2 JASPAR yes 42666602
chr18 666274 666292 ESR2 JASPAR yes 42666603
chr18 666275 666290 ESR2 JASPAR yes 42666604
chr18 666292 666306 TCF7L2 JASPAR yes 42666605
chr18 666295 666301 LEF1 TRANSFAC yes 42666606
chr18 666295 666301 SOX10 JASPAR yes 42666607
chr18 666295 666310 RUNX2 JASPAR yes 42666608
chr18 666308 666323 PRDM1 JASPAR yes 42666609
chr18 666337 666356 CTCF JASPAR yes 42666610
chr18 666371 666382 ESRRA JASPAR yes 42666611
chr18 666372 666390 ESR2 JASPAR yes 42666612
chr18 666374 666389 ESR2 JASPAR yes 42666613
chr18 666375 666379 ESR1 TRANSFAC yes 42666614
chr18 666400 666421 ZNF263 JASPAR yes 42666615
chr18 666431 666452 IRF1 JASPAR yes 42666616
chr18 666433 666448 STAT2 JASPAR yes 42666617
chr18 666434 666448 SPI1 JASPAR yes 42666618
chr18 666435 666449 IRF7 JASPAR yes 42666619
chr18 666435 666449 IRF8 JASPAR yes 42666620
chr18 666446 666454 MEIS3 JASPAR yes 42666621
chr18 666447 666451 NFE TRANSFAC yes 42666622
chr18 666476 666491 ESR2 JASPAR yes 42666623
chr18 666476 666496 ESR1 JASPAR yes 42666624
chr18 666487 666495 SP1 TRANSFAC yes 42666625
chr18 666492 666498 SP1 TRANSFAC yes 42666626
chr18 666492 666502 SP1 JASPAR yes 42666627
chr18 666492 666502 ZNF740 JASPAR yes 42666628
chr18 666493 666504 E2F6 JASPAR yes 42666629
chr18 666496 666504 TBX15 JASPAR yes 42666630
chr18 666496 666505 ZEB1 JASPAR yes 42666631
chr18 666497 666507 FIGLA JASPAR yes 42666632
chr18 666497 666507 TCF4 JASPAR yes 42666633
chr18 666498 666507 SNAI2 JASPAR yes 42666634
chr18 666499 666504 USF2 TRANSFAC yes 42666635
chr18 666501 666516 RFX5 JASPAR yes 42666636
chr18 666502 666506 NFE TRANSFAC yes 42666637
chr18 666527 666539 TEAD1 JASPAR yes 42666638
chr18 666529 666539 TEAD1 JASPAR yes 42666639
chr18 666529 666539 TEAD4 JASPAR yes 42666640
chr18 666530 666538 TEAD3 JASPAR yes 42666641
chr18 666530 666538 TEF-1 TRANSFAC yes 42666642
chr18 666563 666578 HNF4A JASPAR yes 42666643
chr18 666565 666569 LFA1 TRANSFAC yes 42666644
chr18 666573 666594 REST JASPAR yes 42666645
chr18 666574 666593 REST JASPAR yes 42666646
chr18 666588 666597 SNAI2 JASPAR yes 42666647
chr18 666588 666598 ID4 JASPAR yes 42666648
chr18 666588 666598 MSC JASPAR yes 42666649
chr18 666588 666598 TCF3 JASPAR yes 42666650
chr18 666588 666598 TCF4 JASPAR yes 42666651
chr18 666614 666628 RXRB JASPAR yes 42666652
chr18 666614 666628 RXRG JASPAR yes 42666653
chr18 666617 666621 YY1 TRANSFAC yes 42666654
chr18 666626 666645 CTCF JASPAR yes 42666655
chr18 666632 666637 USF2 TRANSFAC yes 42666656
chr18 666637 666643 PEA3 TRANSFAC yes 42666657
chr18 666638 666648 TEAD1 JASPAR yes 42666658
chr18 666638 666648 TEAD4 JASPAR yes 42666659
chr18 666650 666665 JUND JASPAR yes 42666660
chr18 666651 666664 JUN JASPAR yes 42666661
chr18 666652 666666 BATF3 JASPAR yes 42666662
chr18 666653 666665 JDP2 JASPAR yes 42666663
chr18 666681 666695 ONECUT3 JASPAR yes 42666664
chr18 666691 666695 YY1 TRANSFAC yes 42666665
chr18 666703 666707 ESR1 TRANSFAC yes 42666666
SNP sites on vista26537[chr18:666183-666708]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 666265 rs34502878 C T
CTCF RAD21 RARA SP1
5132562
chr18 666273 rs34007153 C A
CTCF ESR1 ESR2 NR3C1 RAD21 RARA
5132563
chr18 666302 rs113382317 T G
CTCF RAD21 RUNX2 TCF7L2
5132564
chr18 666322 rs115838176 C T
CTCF PRDM1 RAD21
5132565
chr18 666371 rs2847149 G A
CTCF ESRRA RAD21
5132566
chr18 666507 rs2853543 C G
CTCF FIGLA RFX5 SNAI2 TCF4
5132567
chr18 666533 rs36080427 G T
CTCF TEAD1 TEAD3 TEAD4 TEF-1
5132568
chr18 666601 rs2612096 A G no 5132569
chr18 666625 rs8088781 C T
RXRB RXRG
5132570
chr18 666632 rs181982947 C A
CTCF USF2
5132571
Genes possibly regulated by vista26537[chr18:666183-666708]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 580367 581524 + CETN1 ENSG00000177143.3 580367 0.96 1.0 16412 14184
chr18 596988 650334 + CLUL1 ENSG00000079101.12 596988 0.94 0.98 16413 30805
chr18 641320 658340 - C18orf56 ENSG00000176912.3 658340 0.94 1.0 16414 92157
chr18 657604 673578 + TYMS ENSG00000176890.11 657604 0.95 1.0 16415 91421
chr18 670324 712676 - ENOSF1 ENSG00000132199.14 712676 0.76 1.0 16416 54032
Expression level of Genes
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miRNAs possibly regulated by vista26537[chr18:666183-666708]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results