EnhancerDB
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  3. vista26538[chr18:667633-668016]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26538[chr18:667633-668016]
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Tissue distribution of vista26538
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Transcription factor that possibly regulate vista26538[chr18:667633-668016]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 667636 667639 MYB TRANSFAC yes 42666667
chr18 667636 667649 ZBTB18 JASPAR yes 42666668
chr18 667668 667686 SRF JASPAR yes 42666669
chr18 667693 667708 FOXA1 JASPAR yes 42666670
chr18 667718 667728 MSC JASPAR yes 42666671
chr18 667720 667732 NHLH1 JASPAR yes 42666672
chr18 667749 667758 ZEB1 JASPAR yes 42666673
chr18 667761 667781 TP63 JASPAR yes 42666674
chr18 667783 667788 MYC TRANSFAC yes 42666675
chr18 667851 667861 PAX7 JASPAR yes 42666676
chr18 667859 667863 YY1 TRANSFAC yes 42666677
chr18 667880 667891 HOXA10 JASPAR yes 42666678
chr18 667881 667890 CDX1 JASPAR yes 42666679
chr18 667881 667891 HOXA13 JASPAR yes 42666680
chr18 667881 667891 HOXB13 JASPAR yes 42666681
chr18 667881 667891 HOXD13 JASPAR yes 42666682
chr18 667882 667893 PHOX2A JASPAR yes 42666683
chr18 667882 667893 PROP1 JASPAR yes 42666684
chr18 667888 667899 RUNX1 JASPAR yes 42666685
chr18 667892 667907 STAT2 JASPAR yes 42666686
chr18 667938 667956 NR3C1 JASPAR yes 42666687
chr18 667949 667970 IRF1 JASPAR yes 42666688
chr18 667950 667971 IRF1 JASPAR yes 42666689
chr18 667956 667962 TCF4 TRANSFAC yes 42666690
chr18 667956 667971 FOXP1 JASPAR yes 42666691
chr18 667956 667977 IRF1 JASPAR yes 42666692
chr18 667962 667977 MEF2C JASPAR yes 42666693
chr18 667968 667974 TCF4 TRANSFAC yes 42666694
chr18 667985 668003 NR3C1 JASPAR yes 42666695
chr18 667987 668008 IRF1 JASPAR yes 42666696
chr18 667990 668011 IRF1 JASPAR yes 42666697
chr18 667991 668006 FOXP1 JASPAR yes 42666698
chr18 667991 668012 IRF1 JASPAR yes 42666699
chr18 667992 668007 FOXP1 JASPAR yes 42666700
chr18 667993 668008 FOXP1 JASPAR yes 42666701
chr18 667994 668009 FOXP1 JASPAR yes 42666702
chr18 667995 668010 FOXP1 JASPAR yes 42666703
chr18 667996 668011 FOXP1 JASPAR yes 42666704
chr18 667997 668012 FOXP1 JASPAR yes 42666705
chr18 667998 668013 FOXP1 JASPAR yes 42666706
chr18 667999 668014 FOXP1 JASPAR yes 42666707
chr18 668006 668016 HOXA13 JASPAR yes 42666708
SNP sites on vista26538[chr18:667633-668016]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 667673 rs557166999 C T
SRF
5132583
chr18 667691 rs118049362 A T no 5132584
chr18 667728 rs147034192 T C
MSC NHLH1
5132585
chr18 667770 rs2606242 C G
TP63
5132586
chr18 667821 rs78835614 C T no 5132587
chr18 667870 rs35626549 C T no 5132588
chr18 667898 rs2853524 T A,C,G
RUNX1 STAT2
5132589
chr18 667900 rs147676914 T C
STAT2
5132590
chr18 667950 rs2853525 T A,C
IRF1 NR3C1
5132591
chr18 667992 rs569828994 A AT
FOXP1 IRF1 NR3C1
5132592
Genes possibly regulated by vista26538[chr18:667633-668016]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 580367 581524 + CETN1 ENSG00000177143.3 580367 0.96 1.0 16412 12734
chr18 596988 650334 + CLUL1 ENSG00000079101.12 596988 0.94 0.98 16413 29355
chr18 641320 658340 - C18orf56 ENSG00000176912.3 658340 0.94 1.0 16414 90707
chr18 657604 673578 + TYMS ENSG00000176890.11 657604 0.95 1.0 16415 89971
chr18 670324 712676 - ENOSF1 ENSG00000132199.14 712676 0.76 1.0 16416 55340
Expression level of Genes
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miRNAs possibly regulated by vista26538[chr18:667633-668016]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results