EnhancerDB
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  3. vista2654[chr1:98512823-98513144]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2654[chr1:98512823-98513144]
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Tissue distribution of vista2654
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Transcription factor that possibly regulate vista2654[chr1:98512823-98513144]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 98512826 98512837 YY2 JASPAR yes 31054162
chr1 98512826 98512837 YY2 JASPAR yes 118338142
chr1 98512833 98512843 HOXA13 JASPAR yes 31054163
chr1 98512833 98512843 HOXA13 JASPAR yes 118338143
chr1 98512834 98512843 CDX1 JASPAR yes 31054164
chr1 98512834 98512843 CDX1 JASPAR yes 118338144
chr1 98512834 98512845 CDX2 JASPAR yes 31054165
chr1 98512834 98512845 CDX2 JASPAR yes 118338145
chr1 98512838 98512847 SRY JASPAR yes 31054166
chr1 98512838 98512847 SRY JASPAR yes 118338146
chr1 98512862 98512876 XBP1 JASPAR yes 31054167
chr1 98512862 98512876 XBP1 JASPAR yes 118338147
chr1 98512863 98512877 CREB3 JASPAR yes 31054168
chr1 98512863 98512877 CREB3L1 JASPAR yes 31054169
chr1 98512863 98512877 CREB3 JASPAR yes 118338148
chr1 98512863 98512877 CREB3L1 JASPAR yes 118338149
chr1 98512864 98512875 NFE2L2 JASPAR yes 31054170
chr1 98512864 98512875 NFE2L2 JASPAR yes 118338150
chr1 98512868 98512873 ATF1 TRANSFAC yes 31054171
chr1 98512868 98512873 ATF1 TRANSFAC yes 118338151
chr1 98512895 98512900 ETS2 TRANSFAC yes 31054172
chr1 98512895 98512900 ETS2 TRANSFAC yes 118338152
chr1 98512913 98512934 IRF1 JASPAR yes 31054173
chr1 98512913 98512934 IRF1 JASPAR yes 118338153
chr1 98512915 98512930 PRDM1 JASPAR yes 31054174
chr1 98512915 98512930 PRDM1 JASPAR yes 118338154
chr1 98512937 98512951 TCF7L2 JASPAR yes 31054175
chr1 98512937 98512951 TCF7L2 JASPAR yes 118338155
chr1 98512937 98512952 LEF1 JASPAR yes 31054176
chr1 98512937 98512952 LEF1 JASPAR yes 118338156
chr1 98512941 98512947 TCF4 TRANSFAC yes 31054177
chr1 98512941 98512947 TCF4 TRANSFAC yes 118338157
chr1 98512950 98512966 SRF JASPAR yes 31054178
chr1 98512950 98512966 SRF JASPAR yes 118338158
chr1 98512961 98512971 SP1 JASPAR yes 31054179
chr1 98512961 98512971 SP1 JASPAR yes 118338159
chr1 98512961 98512982 ZNF263 JASPAR yes 31054180
chr1 98512961 98512982 ZNF263 JASPAR yes 118338160
chr1 98512966 98512976 ZNF740 JASPAR yes 31054181
chr1 98512966 98512976 ZNF740 JASPAR yes 118338161
chr1 98512966 98512978 E2F8 JASPAR yes 31054182
chr1 98512966 98512978 E2F8 JASPAR yes 118338162
chr1 98512977 98512987 NFATC3 JASPAR yes 31054183
chr1 98512977 98512987 NFATC3 JASPAR yes 118338163
chr1 98512977 98512988 FOXB1 JASPAR yes 31054184
chr1 98512977 98512988 FOXC1 JASPAR yes 31054185
chr1 98512977 98512988 FOXB1 JASPAR yes 118338164
chr1 98512977 98512988 FOXC1 JASPAR yes 118338165
chr1 98512979 98512987 FOXO3 JASPAR yes 31054186
chr1 98512979 98512987 FOXO3 JASPAR yes 118338166
chr1 98512997 98513001 YY1 TRANSFAC yes 31054187
chr1 98512997 98513001 YY1 TRANSFAC yes 118338167
chr1 98513003 98513008 H4TF1 TRANSFAC yes 31054188
chr1 98513003 98513008 H4TF1 TRANSFAC yes 118338168
chr1 98513011 98513022 NFIL3 JASPAR yes 31054189
chr1 98513011 98513022 NFIL3 JASPAR yes 118338169
chr1 98513012 98513024 DBP JASPAR yes 31054190
chr1 98513012 98513024 HLF JASPAR yes 31054191
chr1 98513012 98513024 TEF JASPAR yes 31054192
chr1 98513012 98513024 DBP JASPAR yes 118338170
chr1 98513012 98513024 HLF JASPAR yes 118338171
chr1 98513012 98513024 TEF JASPAR yes 118338172
chr1 98513014 98513025 NFIL3 JASPAR yes 31054193
chr1 98513014 98513025 NFIL3 JASPAR yes 118338173
chr1 98513020 98513031 FOXA1 JASPAR yes 31054194
chr1 98513020 98513031 FOXA1 JASPAR yes 118338174
chr1 98513045 98513055 MEOX1 JASPAR yes 31054195
chr1 98513045 98513055 MEOX2 JASPAR yes 31054196
chr1 98513045 98513055 MNX1 JASPAR yes 31054197
chr1 98513045 98513055 MEOX1 JASPAR yes 118338175
chr1 98513045 98513055 MEOX2 JASPAR yes 118338176
chr1 98513045 98513055 MNX1 JASPAR yes 118338177
chr1 98513047 98513058 NFIL3 JASPAR yes 31054198
chr1 98513047 98513058 PHOX2A JASPAR yes 31054199
chr1 98513047 98513058 PROP1 JASPAR yes 31054200
chr1 98513047 98513058 NFIL3 JASPAR yes 118338178
chr1 98513047 98513058 PHOX2A JASPAR yes 118338179
chr1 98513047 98513058 PROP1 JASPAR yes 118338180
chr1 98513048 98513060 DBP JASPAR yes 31054201
chr1 98513048 98513060 HLF JASPAR yes 31054202
chr1 98513048 98513060 TEF JASPAR yes 31054203
chr1 98513048 98513060 DBP JASPAR yes 118338181
chr1 98513048 98513060 HLF JASPAR yes 118338182
chr1 98513048 98513060 TEF JASPAR yes 118338183
chr1 98513050 98513061 NFIL3 JASPAR yes 31054204
chr1 98513050 98513061 NFIL3 JASPAR yes 118338184
chr1 98513053 98513057 TEAD2 TRANSFAC yes 31054205
chr1 98513053 98513057 TEAD2 TRANSFAC yes 118338185
chr1 98513055 98513058 MYB TRANSFAC yes 31054206
chr1 98513055 98513058 MYB TRANSFAC yes 118338186
chr1 98513082 98513099 RARA JASPAR yes 31054207
chr1 98513082 98513099 RARA JASPAR yes 118338187
chr1 98513089 98513092 MYB TRANSFAC yes 31054208
chr1 98513089 98513092 MYB TRANSFAC yes 118338188
chr1 98513093 98513103 RORA JASPAR yes 31054209
chr1 98513093 98513103 RORA JASPAR yes 118338189
chr1 98513121 98513136 FOXA1 JASPAR yes 31054210
chr1 98513121 98513136 FOXA1 JASPAR yes 118338190
chr1 98513122 98513137 FOXP1 JASPAR yes 31054211
chr1 98513122 98513137 FOXP1 JASPAR yes 118338191
chr1 98513125 98513136 FOXA1 JASPAR yes 31054212
chr1 98513125 98513136 FOXA1 JASPAR yes 118338192
chr1 98513134 98513145 FOXC1 JASPAR yes 31054213
chr1 98513134 98513145 FOXC1 JASPAR yes 118338193
chr1 98513135 98513139 YY1 TRANSFAC yes 31054214
chr1 98513135 98513139 YY1 TRANSFAC yes 118338194
SNP sites on vista2654[chr1:98512823-98513144]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 98512840 rs115636918 T C
CDX1 CDX2 HOXA13 SRY
509905
chr1 98512963 rs188405261 G C
SP1 SRF ZNF263
509906
chr1 98512990 rs552885384 G A no 509907
chr1 98513072 rs115108429 A C no 509908
chr1 98513104 rs138462120 G A no 509909
chr1 98513143 rs180819224 T A
FOXC1
509910
chr1 98513144 rs2660303 T A
FOXC1
509911
Genes possibly regulated by vista2654[chr1:98512823-98513144]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista2654[chr1:98512823-98513144]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 98510827 98510848 - hsa-miR-2682-3p MIMAT0013518 98515426 0.03758759821618178 0.895146 0.550145 66
Expression level of miRNAs
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