EnhancerDB
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  3. vista26546[chr18:999057-999295]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26546[chr18:999057-999295]
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Tissue distribution of vista26546
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Transcription factor that possibly regulate vista26546[chr18:999057-999295]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 999049 999057 FOXC1 JASPAR yes 42667017
chr18 999049 999057 FOXC1 JASPAR yes 108621007
chr18 999051 999058 NKX3-1 JASPAR yes 42667018
chr18 999051 999058 NKX3-1 JASPAR yes 108621008
chr18 999062 999066 LFA1 TRANSFAC yes 42667019
chr18 999062 999066 LFA1 TRANSFAC yes 108621009
chr18 999108 999113 ETS2 TRANSFAC yes 42667020
chr18 999108 999113 ETS2 TRANSFAC yes 108621010
chr18 999108 999124 POU4F2 JASPAR yes 42667021
chr18 999108 999124 POU4F3 JASPAR yes 42667022
chr18 999108 999124 POU4F2 JASPAR yes 108621011
chr18 999108 999124 POU4F3 JASPAR yes 108621012
chr18 999111 999121 HOXB2 JASPAR yes 42667023
chr18 999111 999121 HOXB3 JASPAR yes 42667024
chr18 999111 999121 MNX1 JASPAR yes 42667025
chr18 999111 999121 POU6F1 JASPAR yes 42667026
chr18 999111 999121 HOXB2 JASPAR yes 108621013
chr18 999111 999121 HOXB3 JASPAR yes 108621014
chr18 999111 999121 MNX1 JASPAR yes 108621015
chr18 999111 999121 POU6F1 JASPAR yes 108621016
chr18 999112 999120 LMX1A JASPAR yes 42667027
chr18 999112 999120 LMX1B JASPAR yes 42667028
chr18 999112 999120 NKX6-1 JASPAR yes 42667029
chr18 999112 999120 NKX6-2 JASPAR yes 42667030
chr18 999112 999120 VAX1 JASPAR yes 42667031
chr18 999112 999120 VAX2 JASPAR yes 42667032
chr18 999112 999120 VSX1 JASPAR yes 42667033
chr18 999112 999120 VSX2 JASPAR yes 42667034
chr18 999112 999120 LMX1A JASPAR yes 108621017
chr18 999112 999120 LMX1B JASPAR yes 108621018
chr18 999112 999120 NKX6-1 JASPAR yes 108621019
chr18 999112 999120 NKX6-2 JASPAR yes 108621020
chr18 999112 999120 VAX1 JASPAR yes 108621021
chr18 999112 999120 VAX2 JASPAR yes 108621022
chr18 999112 999120 VSX1 JASPAR yes 108621023
chr18 999112 999120 VSX2 JASPAR yes 108621024
chr18 999117 999121 YY1 TRANSFAC yes 42667035
chr18 999117 999121 YY1 TRANSFAC yes 108621025
chr18 999117 999137 TP53 JASPAR yes 42667036
chr18 999117 999137 TP53 JASPAR yes 108621026
chr18 999118 999129 CEBPA JASPAR yes 42667037
chr18 999118 999129 CEBPA JASPAR yes 108621027
chr18 999138 999149 NFKB1 JASPAR yes 42667038
chr18 999138 999149 NFKB1 JASPAR yes 108621028
chr18 999160 999175 STAT1 JASPAR yes 42667039
chr18 999160 999175 STAT1 JASPAR yes 108621029
chr18 999162 999173 STAT1 JASPAR yes 42667040
chr18 999162 999173 STAT1 JASPAR yes 108621030
chr18 999173 999177 YY1 TRANSFAC yes 42667041
chr18 999173 999177 YY1 TRANSFAC yes 108621031
chr18 999173 999184 FOXA1 JASPAR yes 42667042
chr18 999173 999184 FOXA1 JASPAR yes 108621032
chr18 999185 999198 TFAP2A JASPAR yes 42667043
chr18 999185 999198 TFAP2B JASPAR yes 42667044
chr18 999185 999198 TFAP2C JASPAR yes 42667045
chr18 999185 999198 TFAP2A JASPAR yes 108621033
chr18 999185 999198 TFAP2B JASPAR yes 108621034
chr18 999185 999198 TFAP2C JASPAR yes 108621035
chr18 999186 999197 EBF1 JASPAR yes 42667046
chr18 999186 999197 EBF1 JASPAR yes 108621036
chr18 999198 999208 NFATC3 JASPAR yes 42667047
chr18 999198 999208 NFATC3 JASPAR yes 108621037
chr18 999210 999225 MEF2C JASPAR yes 42667048
chr18 999210 999225 MEF2C JASPAR yes 108621038
chr18 999223 999232 SNAI2 JASPAR yes 42667049
chr18 999223 999232 SNAI2 JASPAR yes 108621039
chr18 999236 999251 FOXP1 JASPAR yes 42667050
chr18 999236 999251 FOXP1 JASPAR yes 108621040
chr18 999237 999248 FOXP2 JASPAR yes 42667051
chr18 999237 999248 FOXP2 JASPAR yes 108621041
chr18 999239 999247 FOXO3 JASPAR yes 42667052
chr18 999239 999247 FOXO3 JASPAR yes 108621042
chr18 999243 999254 NRL JASPAR yes 42667053
chr18 999243 999254 NRL JASPAR yes 108621043
chr18 999243 999258 MAFK JASPAR yes 42667054
chr18 999243 999258 MAFK JASPAR yes 108621044
chr18 999264 999285 IRF1 JASPAR yes 42667055
chr18 999264 999285 IRF1 JASPAR yes 108621045
chr18 999266 999281 STAT2 JASPAR yes 42667056
chr18 999266 999281 STAT2 JASPAR yes 108621046
chr18 999268 999288 RREB1 JASPAR yes 42667057
chr18 999268 999288 RREB1 JASPAR yes 108621047
chr18 999268 999289 IRF1 JASPAR yes 42667058
chr18 999268 999289 IRF1 JASPAR yes 108621048
chr18 999269 999284 FOXP1 JASPAR yes 42667059
chr18 999269 999284 FOXP1 JASPAR yes 108621049
chr18 999270 999285 FOXP1 JASPAR yes 42667060
chr18 999270 999285 FOXP1 JASPAR yes 108621050
chr18 999274 999295 IRF1 JASPAR yes 42667061
chr18 999274 999295 IRF1 JASPAR yes 108621051
chr18 999276 999291 STAT2 JASPAR yes 42667062
chr18 999276 999291 STAT2 JASPAR yes 108621052
chr18 999278 999290 IRF1 JASPAR yes 42667063
chr18 999278 999290 IRF1 JASPAR yes 108621053
chr18 999280 999286 TCF4 TRANSFAC yes 42667064
chr18 999280 999286 TCF4 TRANSFAC yes 108621054
chr18 999280 999295 FOXP1 JASPAR yes 42667065
chr18 999280 999295 FOXP1 JASPAR yes 108621055
chr18 999281 999292 FOXP2 JASPAR yes 42667066
chr18 999281 999292 FOXP2 JASPAR yes 108621056
chr18 999281 999293 FOXC2 JASPAR yes 42667067
chr18 999281 999293 FOXC2 JASPAR yes 108621057
chr18 999282 999297 MEF2A JASPAR yes 42667068
chr18 999282 999297 MEF2A JASPAR yes 108621058
chr18 999283 999298 MEF2C JASPAR yes 42667069
chr18 999283 999298 MEF2C JASPAR yes 108621059
SNP sites on vista26546[chr18:999057-999295]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 999236 rs73366007 G A,C
FOXP1
5134646
chr18 999285 rs541754453 G T
FOXC2 FOXP1 FOXP2 IRF1 MEF2A MEF2C RREB1 STAT2 TCF4
5134647
Genes possibly regulated by vista26546[chr18:999057-999295]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 904944 912173 + ADCYAP1 ENSG00000141433.8 904944 0.92 0.99 16418 5887
Expression level of Genes
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miRNAs possibly regulated by vista26546[chr18:999057-999295]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results