EnhancerDB
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  3. vista2676[chr1:100113534-100114036]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2676[chr1:100113534-100114036]
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Tissue distribution of vista2676
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Transcription factor that possibly regulate vista2676[chr1:100113534-100114036]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 100113625 100114075 CTCF UCSC Txn Factor no Conserved 107816518
chr1 100113707 100113964 RAD21 UCSC Txn Factor no Conserved 107816522
chr1 100113566 100113572 YY1 JASPAR yes 118338961
chr1 100113593 100113605 POU2F1 JASPAR yes 118338962
chr1 100113593 100113606 POU3F3 JASPAR yes 118338963
chr1 100113593 100113607 POU1F1 JASPAR yes 118338964
chr1 100113594 100113606 POU3F1 JASPAR yes 118338965
chr1 100113594 100113606 POU3F2 JASPAR yes 118338966
chr1 100113595 100113604 POU3F4 JASPAR yes 118338967
chr1 100113595 100113604 POU5F1B JASPAR yes 118338968
chr1 100113595 100113608 ZBTB18 JASPAR yes 118338969
chr1 100113606 100113620 POU4F1 JASPAR yes 118338970
chr1 100113606 100113622 POU4F2 JASPAR yes 118338971
chr1 100113606 100113622 POU4F3 JASPAR yes 118338972
chr1 100113611 100113626 MAFK JASPAR yes 118338973
chr1 100113622 100113628 TBP TRANSFAC yes 118338974
chr1 100113631 100113644 HSF1 JASPAR yes 118338975
chr1 100113634 100113642 RHOXF1 JASPAR yes 118338976
chr1 100113639 100113652 ATF4 JASPAR yes 118338977
chr1 100113651 100113661 MEF2A JASPAR yes 118338978
chr1 100113658 100113663 GATA2 JASPAR yes 118338979
chr1 100113663 100113667 YY1 TRANSFAC yes 118338980
chr1 100113670 100113680 GSC2 JASPAR yes 118338981
chr1 100113671 100113679 OTX1 JASPAR yes 118338982
chr1 100113671 100113679 OTX2 JASPAR yes 118338983
chr1 100113675 100113684 SRY JASPAR yes 118338984
chr1 100113694 100113702 NR4A2 JASPAR yes 118338985
chr1 100113700 100113706 SOX10 JASPAR yes 118338986
chr1 100113734 100113738 TEAD2 TRANSFAC yes 118338987
chr1 100113734 100113739 TBP TRANSFAC yes 118338988
chr1 100113748 100113763 HSF1 JASPAR yes 118338989
chr1 100113749 100113762 HSF4 JASPAR yes 118338990
chr1 100113752 100113768 SOX8 JASPAR yes 118338991
chr1 100113755 100113765 NFATC3 JASPAR yes 118338992
chr1 100113757 100113764 NFATC2 JASPAR yes 118338993
chr1 100113764 100113774 HOXA13 JASPAR yes 118338994
chr1 100113764 100113774 HOXB13 JASPAR yes 118338995
chr1 100113764 100113774 HOXD13 JASPAR yes 118338996
chr1 100113764 100113779 STAT1 JASPAR yes 118338997
chr1 100113766 100113777 STAT1 JASPAR yes 118338998
chr1 100113778 100113793 STAT1 JASPAR yes 118338999
chr1 100113780 100113791 STAT1 JASPAR yes 118339000
chr1 100113782 100113793 HOXC13 JASPAR yes 118339001
chr1 100113821 100113833 PKNOX1 JASPAR yes 118339002
chr1 100113821 100113833 PKNOX2 JASPAR yes 118339003
chr1 100113821 100113833 TGIF1 JASPAR yes 118339004
chr1 100113821 100113833 TGIF2 JASPAR yes 118339005
chr1 100113824 100113828 YY1 TRANSFAC yes 118339006
chr1 100113828 100113847 CTCF JASPAR yes 118339007
chr1 100113839 100113846 SPIB JASPAR yes 118339008
chr1 100113856 100113875 RFX2 JASPAR yes 118339009
chr1 100113860 100113876 RFX2 JASPAR yes 118339010
chr1 100113860 100113876 RFX3 JASPAR yes 118339011
chr1 100113860 100113876 RFX4 JASPAR yes 118339012
chr1 100113860 100113876 RFX5 JASPAR yes 118339013
chr1 100113861 100113880 RFX2 JASPAR yes 118339014
chr1 100113866 100113876 NFATC3 JASPAR yes 118339015
chr1 100113868 100113876 FOXO3 JASPAR yes 118339016
chr1 100113871 100113891 RREB1 JASPAR yes 118339017
chr1 100113880 100113886 ZNF354C JASPAR yes 118339018
chr1 100113888 100113899 E2F6 JASPAR yes 118339019
chr1 100113901 100113906 SP1 TRANSFAC yes 118339020
chr1 100113907 100113921 XBP1 JASPAR yes 118339021
chr1 100113947 100113954 ETS1 TRANSFAC yes 118339022
chr1 100113973 100113983 MZF1 JASPAR yes 118339023
chr1 100113978 100113993 FOXP1 JASPAR yes 118339024
chr1 100113980 100113992 FOXC2 JASPAR yes 118339025
chr1 100114023 100114027 YY1 TRANSFAC yes 118339026
chr1 100114028 100114032 YY1 TRANSFAC yes 118339027
SNP sites on vista2676[chr1:100113534-100114036]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 100113604 rs541162798 T A
POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B ZBTB18
515357
chr1 100113757 rs141454474 C T
CTCF HSF1 HSF4 NFATC2 NFATC3 RAD21 SOX8
515358
Genes possibly regulated by vista2676[chr1:100113534-100114036]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 100111499 100160097 + PALMD ENSG00000099260.6 100111499 0.88 0.94 926 97965
Expression level of Genes
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miRNAs possibly regulated by vista2676[chr1:100113534-100114036]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results