EnhancerDB
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  3. vista2678[chr1:100138994-100139323]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2678[chr1:100138994-100139323]
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Tissue distribution of vista2678
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Transcription factor that possibly regulate vista2678[chr1:100138994-100139323]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 100139002 100139008 GATA3 JASPAR yes 31122339
chr1 100139002 100139008 GATA3 JASPAR yes 118339093
chr1 100139018 100139028 HOXC10 JASPAR yes 31122340
chr1 100139018 100139028 HOXD11 JASPAR yes 31122341
chr1 100139018 100139028 HOXD13 JASPAR yes 31122342
chr1 100139018 100139028 HOXC10 JASPAR yes 118339094
chr1 100139018 100139028 HOXD11 JASPAR yes 118339095
chr1 100139018 100139028 HOXD13 JASPAR yes 118339096
chr1 100139018 100139029 HOXA10 JASPAR yes 31122343
chr1 100139018 100139029 HOXC11 JASPAR yes 31122344
chr1 100139018 100139029 HOXC12 JASPAR yes 31122345
chr1 100139018 100139029 HOXA10 JASPAR yes 118339097
chr1 100139018 100139029 HOXC11 JASPAR yes 118339098
chr1 100139018 100139029 HOXC12 JASPAR yes 118339099
chr1 100139019 100139028 CDX1 JASPAR yes 31122346
chr1 100139019 100139028 CDX1 JASPAR yes 118339100
chr1 100139019 100139030 CDX2 JASPAR yes 31122347
chr1 100139019 100139030 CDX2 JASPAR yes 118339101
chr1 100139022 100139033 FOXC1 JASPAR yes 31122348
chr1 100139022 100139033 FOXC1 JASPAR yes 118339102
chr1 100139022 100139034 FOXC2 JASPAR yes 31122349
chr1 100139022 100139034 FOXC2 JASPAR yes 118339103
chr1 100139030 100139045 FOXP1 JASPAR yes 31122350
chr1 100139030 100139045 FOXP1 JASPAR yes 118339104
chr1 100139030 100139051 IRF1 JASPAR yes 31122351
chr1 100139030 100139051 IRF1 JASPAR yes 118339105
chr1 100139031 100139046 FOXP1 JASPAR yes 31122352
chr1 100139031 100139046 FOXP1 JASPAR yes 118339106
chr1 100139057 100139072 SOX21 JASPAR yes 31122353
chr1 100139057 100139072 SOX21 JASPAR yes 118339107
chr1 100139065 100139069 YY1 TRANSFAC yes 31122354
chr1 100139065 100139069 YY1 TRANSFAC yes 118339108
chr1 100139075 100139086 PHOX2A JASPAR yes 31122355
chr1 100139075 100139086 PROP1 JASPAR yes 31122356
chr1 100139075 100139086 PHOX2A JASPAR yes 118339109
chr1 100139075 100139086 PROP1 JASPAR yes 118339110
chr1 100139118 100139129 PHOX2A JASPAR yes 31122357
chr1 100139118 100139129 PROP1 JASPAR yes 31122358
chr1 100139118 100139129 PHOX2A JASPAR yes 118339111
chr1 100139118 100139129 PROP1 JASPAR yes 118339112
chr1 100139121 100139131 EVX1 JASPAR yes 31122359
chr1 100139121 100139131 EVX2 JASPAR yes 31122360
chr1 100139121 100139131 HOXA2 JASPAR yes 31122361
chr1 100139121 100139131 HOXB2 JASPAR yes 31122362
chr1 100139121 100139131 MEOX1 JASPAR yes 31122363
chr1 100139121 100139131 MEOX2 JASPAR yes 31122364
chr1 100139121 100139131 EVX1 JASPAR yes 118339113
chr1 100139121 100139131 EVX2 JASPAR yes 118339114
chr1 100139121 100139131 HOXA2 JASPAR yes 118339115
chr1 100139121 100139131 HOXB2 JASPAR yes 118339116
chr1 100139121 100139131 MEOX1 JASPAR yes 118339117
chr1 100139121 100139131 MEOX2 JASPAR yes 118339118
chr1 100139127 100139138 BATF JASPAR yes 31122365
chr1 100139127 100139138 BATF JASPAR yes 118339119
chr1 100139129 100139140 FOS JASPAR yes 31122366
chr1 100139129 100139140 FOSL1 JASPAR yes 31122367
chr1 100139129 100139140 FOS JASPAR yes 118339120
chr1 100139129 100139140 FOSL1 JASPAR yes 118339121
chr1 100139130 100139139 JDP2 JASPAR yes 31122368
chr1 100139130 100139139 JDP2 JASPAR yes 118339122
chr1 100139131 100139142 BATF JASPAR yes 31122369
chr1 100139131 100139142 BATF JASPAR yes 118339123
chr1 100139163 100139181 SRF JASPAR yes 31122370
chr1 100139163 100139181 SRF JASPAR yes 118339124
chr1 100139165 100139177 HNF1B JASPAR yes 31122371
chr1 100139165 100139177 HNF1B JASPAR yes 118339125
chr1 100139169 100139173 YY1 TRANSFAC yes 31122372
chr1 100139169 100139173 YY1 TRANSFAC yes 118339126
chr1 100139175 100139185 EN2 JASPAR yes 31122373
chr1 100139175 100139185 ESX1 JASPAR yes 31122374
chr1 100139175 100139185 GBX1 JASPAR yes 31122375
chr1 100139175 100139185 GBX2 JASPAR yes 31122376
chr1 100139175 100139185 GSX1 JASPAR yes 31122377
chr1 100139175 100139185 HESX1 JASPAR yes 31122378
chr1 100139175 100139185 HOXB3 JASPAR yes 31122379
chr1 100139175 100139185 LBX2 JASPAR yes 31122380
chr1 100139175 100139185 LHX2 JASPAR yes 31122381
chr1 100139175 100139185 RAX JASPAR yes 31122382
chr1 100139175 100139185 EN2 JASPAR yes 118339127
chr1 100139175 100139185 ESX1 JASPAR yes 118339128
chr1 100139175 100139185 GBX1 JASPAR yes 118339129
chr1 100139175 100139185 GBX2 JASPAR yes 118339130
chr1 100139175 100139185 GSX1 JASPAR yes 118339131
chr1 100139175 100139185 HESX1 JASPAR yes 118339132
chr1 100139175 100139185 HOXB3 JASPAR yes 118339133
chr1 100139175 100139185 LBX2 JASPAR yes 118339134
chr1 100139175 100139185 LHX2 JASPAR yes 118339135
chr1 100139175 100139185 RAX JASPAR yes 118339136
chr1 100139176 100139184 BARX1 JASPAR yes 31122383
chr1 100139176 100139184 BSX JASPAR yes 31122384
chr1 100139176 100139184 EN1 JASPAR yes 31122385
chr1 100139176 100139184 ISX JASPAR yes 31122386
chr1 100139176 100139184 LHX9 JASPAR yes 31122387
chr1 100139176 100139184 MSX1 JASPAR yes 31122388
chr1 100139176 100139184 MSX2 JASPAR yes 31122389
chr1 100139176 100139184 PRRX1 JASPAR yes 31122390
chr1 100139176 100139184 RAX2 JASPAR yes 31122391
chr1 100139176 100139184 SHOX JASPAR yes 31122392
chr1 100139176 100139184 BARX1 JASPAR yes 118339137
chr1 100139176 100139184 BSX JASPAR yes 118339138
chr1 100139176 100139184 EN1 JASPAR yes 118339139
chr1 100139176 100139184 ISX JASPAR yes 118339140
chr1 100139176 100139184 LHX9 JASPAR yes 118339141
chr1 100139176 100139184 MSX1 JASPAR yes 118339142
chr1 100139176 100139184 MSX2 JASPAR yes 118339143
chr1 100139176 100139184 PRRX1 JASPAR yes 118339144
chr1 100139176 100139184 RAX2 JASPAR yes 118339145
chr1 100139176 100139184 SHOX JASPAR yes 118339146
chr1 100139176 100139185 VENTX JASPAR yes 31122393
chr1 100139176 100139185 VENTX JASPAR yes 118339147
chr1 100139177 100139187 PAX3 JASPAR yes 31122394
chr1 100139177 100139187 PAX3 JASPAR yes 118339148
chr1 100139177 100139188 DUX4 JASPAR yes 31122395
chr1 100139177 100139188 PHOX2A JASPAR yes 31122396
chr1 100139177 100139188 PROP1 JASPAR yes 31122397
chr1 100139177 100139188 DUX4 JASPAR yes 118339149
chr1 100139177 100139188 PHOX2A JASPAR yes 118339150
chr1 100139177 100139188 PROP1 JASPAR yes 118339151
chr1 100139211 100139229 IRF2 JASPAR yes 31122398
chr1 100139211 100139229 IRF2 JASPAR yes 118339152
chr1 100139212 100139227 FOXP1 JASPAR yes 31122399
chr1 100139212 100139227 FOXP1 JASPAR yes 118339153
chr1 100139214 100139229 STAT2 JASPAR yes 31122400
chr1 100139214 100139229 STAT2 JASPAR yes 118339154
chr1 100139215 100139223 FOXO3 JASPAR yes 31122401
chr1 100139215 100139223 FOXO3 JASPAR yes 118339155
chr1 100139215 100139229 STAT1 JASPAR yes 31122402
chr1 100139215 100139229 STAT1 JASPAR yes 118339156
chr1 100139216 100139228 IRF1 JASPAR yes 31122403
chr1 100139216 100139228 IRF1 JASPAR yes 118339157
chr1 100139216 100139230 IRF7 JASPAR yes 31122404
chr1 100139216 100139230 IRF7 JASPAR yes 118339158
chr1 100139224 100139235 STAT3 JASPAR yes 31122405
chr1 100139224 100139235 STAT3 JASPAR yes 118339159
chr1 100139230 100139236 GATA3 JASPAR yes 31122406
chr1 100139230 100139236 GATA3 JASPAR yes 118339160
chr1 100139238 100139253 MEF2A JASPAR yes 31122407
chr1 100139238 100139253 MEF2A JASPAR yes 118339161
chr1 100139239 100139254 MEF2C JASPAR yes 31122408
chr1 100139239 100139254 MEF2C JASPAR yes 118339162
chr1 100139240 100139252 MEF2A JASPAR yes 31122409
chr1 100139240 100139252 MEF2B JASPAR yes 31122410
chr1 100139240 100139252 MEF2D JASPAR yes 31122411
chr1 100139240 100139252 MEF2A JASPAR yes 118339163
chr1 100139240 100139252 MEF2B JASPAR yes 118339164
chr1 100139240 100139252 MEF2D JASPAR yes 118339165
chr1 100139240 100139256 POU4F2 JASPAR yes 31122412
chr1 100139240 100139256 POU4F3 JASPAR yes 31122413
chr1 100139240 100139256 POU4F2 JASPAR yes 118339166
chr1 100139240 100139256 POU4F3 JASPAR yes 118339167
chr1 100139241 100139251 MEF2A JASPAR yes 31122414
chr1 100139241 100139251 MEF2A JASPAR yes 118339168
chr1 100139242 100139246 YY1 TRANSFAC yes 31122415
chr1 100139242 100139246 YY1 TRANSFAC yes 118339169
chr1 100139242 100139256 POU4F1 JASPAR yes 31122416
chr1 100139242 100139256 POU4F1 JASPAR yes 118339170
chr1 100139268 100139271 MYB TRANSFAC yes 31122417
chr1 100139268 100139271 MYB TRANSFAC yes 118339171
chr1 100139292 100139306 TCF7L2 JASPAR yes 31122418
chr1 100139292 100139306 TCF7L2 JASPAR yes 118339172
chr1 100139293 100139314 IRF1 JASPAR yes 31122419
chr1 100139293 100139314 IRF1 JASPAR yes 118339173
chr1 100139299 100139320 ZNF263 JASPAR yes 31122420
chr1 100139299 100139320 ZNF263 JASPAR yes 118339174
chr1 100139304 100139318 SPI1 JASPAR yes 31122421
chr1 100139304 100139318 SPIC JASPAR yes 31122422
chr1 100139304 100139318 SPI1 JASPAR yes 118339175
chr1 100139304 100139318 SPIC JASPAR yes 118339176
chr1 100139310 100139315 ETS2 TRANSFAC yes 31122423
chr1 100139310 100139315 ETS2 TRANSFAC yes 118339177
SNP sites on vista2678[chr1:100138994-100139323]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 100139051 rs201167324 G GA
IRF1
515617
chr1 100139071 rs12066969 G T
SOX21
515618
chr1 100139142 rs61784992 T A
BATF
515619
chr1 100139143 rs61784993 C A,T no 515620
chr1 100139144 rs61784994 G T no 515621
chr1 100139258 rs145699881 A G no 515622
chr1 100139272 rs115063593 C T no 515623
chr1 100139272 rs200744786 C CA no 515624
chr1 100139291 rs12035402 C A no 515625
Genes possibly regulated by vista2678[chr1:100138994-100139323]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 100111499 100160097 + PALMD ENSG00000099260.6 100111499 0.88 0.94 926 72505
chr1 100174259 100232187 - FRRS1 ENSG00000156869.8 100232187 0.62 0.99 927 7136
Expression level of Genes
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miRNAs possibly regulated by vista2678[chr1:100138994-100139323]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results