EnhancerDB
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  3. vista2679[chr1:100140321-100140582]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2679[chr1:100140321-100140582]
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Tissue distribution of vista2679
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Transcription factor that possibly regulate vista2679[chr1:100140321-100140582]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 100140315 100140330 FOXP1 JASPAR yes 31122626
chr1 100140315 100140330 FOXP1 JASPAR yes 118339178
chr1 100140317 100140323 JUN TRANSFAC yes 31122627
chr1 100140317 100140323 JUN TRANSFAC yes 118339179
chr1 100140322 100140337 FOXP1 JASPAR yes 31122628
chr1 100140322 100140337 FOXP1 JASPAR yes 118339180
chr1 100140331 100140337 SOX10 JASPAR yes 31122629
chr1 100140331 100140337 SOX10 JASPAR yes 118339181
chr1 100140344 100140359 HSF1 JASPAR yes 31122630
chr1 100140344 100140359 HSF1 JASPAR yes 118339182
chr1 100140345 100140358 HSF1 JASPAR yes 31122631
chr1 100140345 100140358 HSF2 JASPAR yes 31122632
chr1 100140345 100140358 HSF4 JASPAR yes 31122633
chr1 100140345 100140358 HSF1 JASPAR yes 118339183
chr1 100140345 100140358 HSF2 JASPAR yes 118339184
chr1 100140345 100140358 HSF4 JASPAR yes 118339185
chr1 100140400 100140411 CDX2 JASPAR yes 31122634
chr1 100140400 100140411 CDX2 JASPAR yes 118339186
chr1 100140401 100140405 ESR1 TRANSFAC yes 31122635
chr1 100140401 100140405 ESR1 TRANSFAC yes 118339187
chr1 100140402 100140411 CDX1 JASPAR yes 31122636
chr1 100140402 100140411 CDX1 JASPAR yes 118339188
chr1 100140414 100140427 HSF1 JASPAR yes 31122637
chr1 100140414 100140427 HSF1 JASPAR yes 118339189
chr1 100140440 100140455 PRDM1 JASPAR yes 31122638
chr1 100140440 100140455 PRDM1 JASPAR yes 118339190
chr1 100140440 100140458 IRF2 JASPAR yes 31122639
chr1 100140440 100140458 IRF2 JASPAR yes 118339191
chr1 100140460 100140473 SMAD2 JASPAR yes 31122640
chr1 100140460 100140473 SMAD2 JASPAR yes 118339192
chr1 100140479 100140493 SPI1 JASPAR yes 31122641
chr1 100140479 100140493 SPI1 JASPAR yes 118339193
chr1 100140508 100140515 JUN TRANSFAC yes 31122642
chr1 100140508 100140515 JUN TRANSFAC yes 118339194
chr1 100140515 100140526 HOXC13 JASPAR yes 31122643
chr1 100140515 100140526 HOXC13 JASPAR yes 118339195
chr1 100140541 100140551 SP1 JASPAR yes 31122644
chr1 100140541 100140551 SP1 JASPAR yes 118339196
chr1 100140575 100140588 POU2F2 JASPAR yes 31122645
chr1 100140575 100140588 POU2F2 JASPAR yes 118339197
chr1 100140575 100140595 PPARG JASPAR yes 31122646
chr1 100140575 100140595 PPARG JASPAR yes 118339198
SNP sites on vista2679[chr1:100140321-100140582]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 100140340 rs140873354 G A no 515642
chr1 100140414 rs4908003 T A
HSF1
515643
chr1 100140478 rs116202132 T C,G no 515644
chr1 100140487 rs113920079 G C
SPI1
515645
chr1 100140509 rs7549467 G A
JUN
515646
chr1 100140555 rs7527792 C T no 515647
chr1 100140556 rs114412508 G A no 515648
Genes possibly regulated by vista2679[chr1:100140321-100140582]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 100111499 100160097 + PALMD ENSG00000099260.6 100111499 0.88 0.94 926 71178
chr1 100174259 100232187 - FRRS1 ENSG00000156869.8 100232187 0.62 0.99 927 8395
Expression level of Genes
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miRNAs possibly regulated by vista2679[chr1:100140321-100140582]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results