EnhancerDB
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  3. vista2685[chr1:100505302-100505632]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2685[chr1:100505302-100505632]
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Tissue distribution of vista2685
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Transcription factor that possibly regulate vista2685[chr1:100505302-100505632]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 100505304 100505308 YY1 TRANSFAC yes 118339444
chr1 100505324 100505328 YY1 TRANSFAC yes 118339445
chr1 100505337 100505341 YY1 TRANSFAC yes 118339446
chr1 100505349 100505370 IRF1 JASPAR yes 118339447
chr1 100505353 100505368 PRDM1 JASPAR yes 118339448
chr1 100505353 100505368 STAT2 JASPAR yes 118339449
chr1 100505353 100505371 IRF2 JASPAR yes 118339450
chr1 100505354 100505370 SOX4 JASPAR yes 118339451
chr1 100505361 100505371 PAX3 JASPAR yes 118339452
chr1 100505373 100505379 HiNF-A TRANSFAC yes 118339453
chr1 100505377 100505392 STAT2 JASPAR yes 118339454
chr1 100505378 100505392 STAT1 JASPAR yes 118339455
chr1 100505382 100505387 ETS2 TRANSFAC yes 118339456
chr1 100505388 100505393 ETS2 TRANSFAC yes 118339457
chr1 100505401 100505416 STAT2 JASPAR yes 118339458
chr1 100505404 100505414 HOXA13 JASPAR yes 118339459
chr1 100505404 100505414 HOXB13 JASPAR yes 118339460
chr1 100505404 100505414 HOXD13 JASPAR yes 118339461
chr1 100505404 100505415 HOXA10 JASPAR yes 118339462
chr1 100505404 100505415 HOXC12 JASPAR yes 118339463
chr1 100505405 100505414 CDX1 JASPAR yes 118339464
chr1 100505405 100505415 MNX1 JASPAR yes 118339465
chr1 100505405 100505416 CDX2 JASPAR yes 118339466
chr1 100505419 100505439 RREB1 JASPAR yes 118339467
chr1 100505423 100505443 RREB1 JASPAR yes 118339468
chr1 100505426 100505432 TCF4 TRANSFAC yes 118339469
chr1 100505446 100505456 NHLH1 JASPAR yes 118339470
chr1 100505478 100505496 NR3C1 JASPAR yes 118339471
chr1 100505479 100505486 NFATC2 JASPAR yes 118339472
chr1 100505497 100505511 STAT1 JASPAR yes 118339473
chr1 100505508 100505520 MEF2A JASPAR yes 118339474
chr1 100505509 100505519 MEF2A JASPAR yes 118339475
chr1 100505522 100505532 EMX1 JASPAR yes 118339476
chr1 100505522 100505532 GSX2 JASPAR yes 118339477
chr1 100505522 100505532 HOXB2 JASPAR yes 118339478
chr1 100505522 100505532 MEOX2 JASPAR yes 118339479
chr1 100505522 100505532 MNX1 JASPAR yes 118339480
chr1 100505523 100505531 LMX1A JASPAR yes 118339481
chr1 100505523 100505531 LMX1B JASPAR yes 118339482
chr1 100505523 100505531 NKX6-1 JASPAR yes 118339483
chr1 100505523 100505531 NKX6-2 JASPAR yes 118339484
chr1 100505523 100505531 PDX1 JASPAR yes 118339485
chr1 100505523 100505531 VAX1 JASPAR yes 118339486
chr1 100505523 100505531 VAX2 JASPAR yes 118339487
chr1 100505523 100505531 VSX1 JASPAR yes 118339488
chr1 100505524 100505534 PAX3 JASPAR yes 118339489
chr1 100505524 100505534 PAX7 JASPAR yes 118339490
chr1 100505571 100505584 SCRT2 JASPAR yes 118339491
SNP sites on vista2685[chr1:100505302-100505632]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 100505332 rs76461538 G C no 516927
chr1 100505608 rs115171470 T A no 516928
Genes possibly regulated by vista2685[chr1:100505302-100505632]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 100435345 100492535 + SLC35A3 ENSG00000117620.8 100435345 0.67 0.99 929 30043
chr1 100503653 100548933 + HIAT1 ENSG00000156875.9 100503653 0.67 0.99 930 98351
chr1 100549119 100598511 - SASS6 ENSG00000156876.8 100598511 0.73 0.98 931 7121
chr1 100598706 100616053 + TRMT13 ENSG00000122435.5 100598706 0.69 0.97 932 6926
Expression level of Genes
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miRNAs possibly regulated by vista2685[chr1:100505302-100505632]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results