EnhancerDB
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  3. vista2694[chr1:100859089-100859486]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2694[chr1:100859089-100859486]
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Tissue distribution of vista2694
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Transcription factor that possibly regulate vista2694[chr1:100859089-100859486]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 100859099 100859103 NFE TRANSFAC yes 118339864
chr1 100859100 100859112 PKNOX1 JASPAR yes 118339865
chr1 100859106 100859111 GATA1 TRANSFAC yes 118339866
chr1 100859133 100859138 GATA1 TRANSFAC yes 118339867
chr1 100859158 100859174 SOX4 JASPAR yes 118339868
chr1 100859162 100859174 NHLH1 JASPAR yes 118339869
chr1 100859163 100859173 NHLH1 JASPAR yes 118339870
chr1 100859168 100859179 ELK4 JASPAR yes 118339871
chr1 100859168 100859179 FLI1 JASPAR yes 118339872
chr1 100859192 100859203 ESRRB JASPAR yes 118339873
chr1 100859194 100859197 MYB TRANSFAC yes 118339874
chr1 100859194 100859202 SF1 TRANSFAC yes 118339875
chr1 100859214 100859223 NKX2-8 JASPAR yes 118339876
chr1 100859214 100859224 NKX2-3 JASPAR yes 118339877
chr1 100859221 100859225 ESR1 TRANSFAC yes 118339878
chr1 100859226 100859238 PBX1 JASPAR yes 118339879
chr1 100859254 100859275 LUN1 TRANSFAC yes 118339880
chr1 100859278 100859283 SP1 TRANSFAC yes 118339881
chr1 100859279 100859284 SP1 TRANSFAC yes 118339882
chr1 100859282 100859287 SP1 TRANSFAC yes 118339883
chr1 100859290 100859300 RORA JASPAR yes 118339884
chr1 100859291 100859302 ESRRA JASPAR yes 118339885
chr1 100859291 100859302 ESRRB JASPAR yes 118339886
chr1 100859291 100859304 NR2F1 JASPAR yes 118339887
chr1 100859293 100859301 NR4A2 JASPAR yes 118339888
chr1 100859294 100859311 RARA JASPAR yes 118339889
chr1 100859294 100859311 RXRA JASPAR yes 118339890
chr1 100859295 100859299 ESR1 TRANSFAC yes 118339891
chr1 100859307 100859325 NR3C1 JASPAR yes 118339892
chr1 100859331 100859346 MEF2C JASPAR yes 118339893
chr1 100859332 100859347 MEF2A JASPAR yes 118339894
chr1 100859333 100859345 MEF2A JASPAR yes 118339895
chr1 100859333 100859345 MEF2B JASPAR yes 118339896
chr1 100859333 100859345 MEF2D JASPAR yes 118339897
chr1 100859350 100859369 REST JASPAR yes 118339898
chr1 100859354 100859364 SP1 JASPAR yes 118339899
chr1 100859431 100859448 ESR1 JASPAR yes 118339900
chr1 100859431 100859449 ESR2 JASPAR yes 118339901
chr1 100859435 100859449 TLX1 JASPAR yes 118339902
chr1 100859449 100859460 CEBPB JASPAR yes 118339903
chr1 100859450 100859460 CEBPB JASPAR yes 118339904
chr1 100859450 100859460 CEBPD JASPAR yes 118339905
chr1 100859450 100859460 CEBPE JASPAR yes 118339906
chr1 100859450 100859460 CEBPG JASPAR yes 118339907
SNP sites on vista2694[chr1:100859089-100859486]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 100859230 rs184180633 T A
PBX1
517998
chr1 100859355 rs7516172 T C
REST SP1
517999
chr1 100859359 rs550178388 C T
REST SP1
518000
chr1 100859413 rs141581721 C T no 518001
chr1 100859422 rs566180173 C T no 518002
chr1 100859484 rs554793936 C T no 518003
Genes possibly regulated by vista2694[chr1:100859089-100859486]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 100810584 100985833 + CDC14A ENSG00000079335.13 100810584 0.89 0.98 936 51495
Expression level of Genes
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miRNAs possibly regulated by vista2694[chr1:100859089-100859486]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results