EnhancerDB
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  3. vista2696[chr1:100878516-100878703]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2696[chr1:100878516-100878703]
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Tissue distribution of vista2696
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Transcription factor that possibly regulate vista2696[chr1:100878516-100878703]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 100878600 100878909 FOXA1 UCSC Txn Factor no Conserved 107816739
chr1 100878545 100878562 ESR1 JASPAR yes 31148659
chr1 100878545 100878562 ESR1 JASPAR yes 118339996
chr1 100878554 100878564 SREBF1 JASPAR yes 31148660
chr1 100878554 100878564 SREBF1 JASPAR yes 118339997
chr1 100878593 100878611 IRF2 JASPAR yes 31148661
chr1 100878593 100878611 IRF2 JASPAR yes 118339998
chr1 100878604 100878608 NFE TRANSFAC yes 31148662
chr1 100878604 100878608 NFE TRANSFAC yes 118339999
chr1 100878604 100878611 MEIS1 JASPAR yes 31148663
chr1 100878604 100878611 MEIS1 JASPAR yes 118340000
chr1 100878609 100878624 FOXP1 JASPAR yes 31148664
chr1 100878609 100878624 FOXP1 JASPAR yes 118340001
chr1 100878609 100878630 IRF1 JASPAR yes 31148665
chr1 100878609 100878630 IRF1 JASPAR yes 118340002
chr1 100878610 100878631 IRF1 JASPAR yes 31148666
chr1 100878610 100878631 IRF1 JASPAR yes 118340003
chr1 100878614 100878629 FOXP1 JASPAR yes 31148667
chr1 100878614 100878629 FOXP1 JASPAR yes 118340004
chr1 100878615 100878636 IRF1 JASPAR yes 31148668
chr1 100878615 100878636 IRF1 JASPAR yes 118340005
chr1 100878616 100878631 FOXP1 JASPAR yes 31148669
chr1 100878616 100878631 LEF1 JASPAR yes 31148670
chr1 100878616 100878631 FOXP1 JASPAR yes 118340006
chr1 100878616 100878631 LEF1 JASPAR yes 118340007
chr1 100878617 100878638 IRF1 JASPAR yes 31148671
chr1 100878617 100878638 IRF1 JASPAR yes 118340008
chr1 100878623 100878638 LEF1 JASPAR yes 31148672
chr1 100878623 100878638 LEF1 JASPAR yes 118340009
chr1 100878630 100878644 JUN JASPAR yes 31148673
chr1 100878630 100878644 JUN JASPAR yes 118340010
chr1 100878632 100878650 NR3C1 JASPAR yes 31148674
chr1 100878632 100878650 NR3C1 JASPAR yes 118340011
chr1 100878635 100878648 DUXA JASPAR yes 31148675
chr1 100878635 100878648 DUXA JASPAR yes 118340012
chr1 100878636 100878647 DUX4 JASPAR yes 31148676
chr1 100878636 100878647 DUX4 JASPAR yes 118340013
chr1 100878647 100878655 GATA5 JASPAR yes 31148677
chr1 100878647 100878655 GATA5 JASPAR yes 118340014
chr1 100878670 100878674 NFE TRANSFAC yes 31148678
chr1 100878670 100878674 NFE TRANSFAC yes 118340015
chr1 100878671 100878682 USF1 JASPAR yes 31148679
chr1 100878671 100878682 USF1 JASPAR yes 118340016
chr1 100878671 100878683 PKNOX2 JASPAR yes 31148680
chr1 100878671 100878683 PKNOX2 JASPAR yes 118340017
chr1 100878672 100878682 TFE3 JASPAR yes 31148681
chr1 100878672 100878682 TFEB JASPAR yes 31148682
chr1 100878672 100878682 TFEC JASPAR yes 31148683
chr1 100878672 100878682 TFE3 JASPAR yes 118340018
chr1 100878672 100878682 TFEB JASPAR yes 118340019
chr1 100878672 100878682 TFEC JASPAR yes 118340020
chr1 100878672 100878683 USF2 JASPAR yes 31148684
chr1 100878672 100878683 USF2 JASPAR yes 118340021
chr1 100878678 100878688 MAX JASPAR yes 31148685
chr1 100878678 100878688 MAX JASPAR yes 118340022
chr1 100878678 100878690 HES5 JASPAR yes 31148686
chr1 100878678 100878690 HES5 JASPAR yes 118340023
chr1 100878679 100878689 NEUROG2 JASPAR yes 31148687
chr1 100878679 100878689 NEUROG2 JASPAR yes 118340024
chr1 100878693 100878698 MYC TRANSFAC yes 31148688
chr1 100878693 100878698 MYC TRANSFAC yes 118340025
SNP sites on vista2696[chr1:100878516-100878703]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 100878596 rs547483972 A G
IRF2
518152
Genes possibly regulated by vista2696[chr1:100878516-100878703]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 100810584 100985833 + CDC14A ENSG00000079335.13 100810584 0.89 0.98 936 32068
Expression level of Genes
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miRNAs possibly regulated by vista2696[chr1:100878516-100878703]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results