EnhancerDB
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  3. vista27486[chr18:51703852-51704220]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27486[chr18:51703852-51704220]
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Tissue distribution of vista27486
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Transcription factor that possibly regulate vista27486[chr18:51703852-51704220]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 51703844 51703854 PAX3 JASPAR yes 42709955
chr18 51703844 51703854 PAX3 JASPAR yes 110703746
chr18 51703845 51703866 IRF1 JASPAR yes 42709956
chr18 51703845 51703866 IRF1 JASPAR yes 110703747
chr18 51703848 51703862 SPI1 JASPAR yes 42709957
chr18 51703848 51703862 SPI1 JASPAR yes 110703748
chr18 51703851 51703856 ETS2 TRANSFAC yes 42709958
chr18 51703851 51703856 ETS2 TRANSFAC yes 110703749
chr18 51703854 51703869 FOXP1 JASPAR yes 42709959
chr18 51703854 51703869 FOXP1 JASPAR yes 110703750
chr18 51703876 51703895 PAX5 JASPAR yes 42709960
chr18 51703876 51703895 PAX5 JASPAR yes 110703751
chr18 51703884 51703888 NFE TRANSFAC yes 42709961
chr18 51703884 51703888 NFE TRANSFAC yes 110703752
chr18 51703931 51703940 SP1 TRANSFAC yes 42709962
chr18 51703931 51703940 SP1 TRANSFAC yes 110703753
chr18 51703932 51703940 SP1 TRANSFAC yes 42709963
chr18 51703932 51703940 SP1 TRANSFAC yes 110703754
chr18 51703932 51703942 SP1 JASPAR yes 42709964
chr18 51703932 51703942 SP1 JASPAR yes 110703755
chr18 51703936 51703947 E2F4 JASPAR yes 42709965
chr18 51703936 51703947 E2F6 JASPAR yes 42709966
chr18 51703936 51703947 E2F4 JASPAR yes 110703756
chr18 51703936 51703947 E2F6 JASPAR yes 110703757
chr18 51703937 51703948 E2F1 JASPAR yes 42709967
chr18 51703937 51703948 E2F1 JASPAR yes 110703758
chr18 51703946 51703956 SREBF2 JASPAR yes 42709968
chr18 51703946 51703956 SREBF2 JASPAR yes 110703759
chr18 51704002 51704012 SP1 JASPAR yes 42709969
chr18 51704002 51704012 SP1 JASPAR yes 110703760
chr18 51704002 51704021 PAX5 JASPAR yes 42709970
chr18 51704002 51704021 PAX5 JASPAR yes 110703761
chr18 51704005 51704010 SP1 TRANSFAC yes 42709971
chr18 51704005 51704010 SP1 TRANSFAC yes 110703762
chr18 51704019 51704030 NFIL3 JASPAR yes 42709972
chr18 51704019 51704030 NFIL3 JASPAR yes 110703763
chr18 51704022 51704034 MEF2B JASPAR yes 42709973
chr18 51704022 51704034 MEF2D JASPAR yes 42709974
chr18 51704022 51704034 MEF2B JASPAR yes 110703764
chr18 51704022 51704034 MEF2D JASPAR yes 110703765
chr18 51704034 51704044 SP1 JASPAR yes 42709975
chr18 51704034 51704044 SP1 JASPAR yes 110703766
chr18 51704087 51704092 GATA2 JASPAR yes 42709976
chr18 51704087 51704092 GATA2 JASPAR yes 110703767
chr18 51704090 51704095 SP1 TRANSFAC yes 42709977
chr18 51704090 51704095 SP1 TRANSFAC yes 110703768
chr18 51704129 51704140 FOSL2 JASPAR yes 42709978
chr18 51704139 51704149 PAX3 JASPAR yes 42709979
chr18 51704169 51704172 MYB TRANSFAC yes 42709980
chr18 51704176 51704197 IRF1 JASPAR yes 42709981
chr18 51704179 51704183 YY1 TRANSFAC yes 42709982
chr18 51704182 51704197 FOXP1 JASPAR yes 42709983
chr18 51704187 51704208 IRF1 JASPAR yes 42709984
chr18 51704189 51704196 SPIB JASPAR yes 42709985
chr18 51704189 51704204 PRDM1 JASPAR yes 42709986
chr18 51704189 51704210 IRF1 JASPAR yes 42709987
chr18 51704191 51704212 IRF1 JASPAR yes 42709988
chr18 51704192 51704207 FOXP1 JASPAR yes 42709989
chr18 51704192 51704213 IRF1 JASPAR yes 42709990
chr18 51704193 51704208 STAT2 JASPAR yes 42709991
chr18 51704193 51704214 IRF1 JASPAR yes 42709992
chr18 51704194 51704209 FOXP1 JASPAR yes 42709993
chr18 51704194 51704215 IRF1 JASPAR yes 42709994
chr18 51704195 51704216 IRF1 JASPAR yes 42709995
chr18 51704196 51704211 FOXP1 JASPAR yes 42709996
chr18 51704196 51704217 IRF1 JASPAR yes 42709997
chr18 51704197 51704212 FOXP1 JASPAR yes 42709998
chr18 51704197 51704218 IRF1 JASPAR yes 42709999
chr18 51704198 51704213 FOXP1 JASPAR yes 42710000
chr18 51704198 51704219 IRF1 JASPAR yes 42710001
chr18 51704199 51704214 FOXP1 JASPAR yes 42710002
chr18 51704199 51704220 IRF1 JASPAR yes 42710003
chr18 51704200 51704215 FOXP1 JASPAR yes 42710004
chr18 51704201 51704216 FOXP1 JASPAR yes 42710005
chr18 51704202 51704217 FOXP1 JASPAR yes 42710006
chr18 51704203 51704218 FOXP1 JASPAR yes 42710007
chr18 51704204 51704219 FOXP1 JASPAR yes 42710008
chr18 51704205 51704220 FOXP1 JASPAR yes 42710009
SNP sites on vista27486[chr18:51703852-51704220]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 51703882 rs147063077 G T
PAX5
5262799
chr18 51703904 rs547967411 G T no 5262800
chr18 51703912 rs191968478 G A no 5262801
chr18 51703980 rs111613255 A G no 5262802
chr18 51704139 rs71164917 T TGCGCCCGGCC
FOSL2 PAX3
5262803
Genes possibly regulated by vista27486[chr18:51703852-51704220]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 51679079 51751158 - MBD2 ENSG00000134046.7 51751158 0.75 1.0 16595 53062
chr18 51795774 51847636 + POLI ENSG00000101751.6 51795774 0.79 0.99 16596 8446
Expression level of Genes
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miRNAs possibly regulated by vista27486[chr18:51703852-51704220]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results