EnhancerDB
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  3. vista27492[chr18:51860775-51860976]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27492[chr18:51860775-51860976]
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Tissue distribution of vista27492
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Transcription factor that possibly regulate vista27492[chr18:51860775-51860976]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 51860775 51860779 H1TF2 TRANSFAC yes 42710302
chr18 51860775 51860779 NFE TRANSFAC yes 42710303
chr18 51860775 51860779 SRF TRANSFAC yes 42710304
chr18 51860805 51860823 RARA JASPAR yes 42710305
chr18 51860809 51860821 INSM1 JASPAR yes 42710306
chr18 51860809 51860824 NR2C2 JASPAR yes 42710307
chr18 51860812 51860825 NR2F1 JASPAR yes 42710308
chr18 51860814 51860825 ESRRA JASPAR yes 42710309
chr18 51860815 51860823 NR4A2 JASPAR yes 42710310
chr18 51860815 51860830 HNF4A JASPAR yes 42710311
chr18 51860816 51860830 NR2F1 JASPAR yes 42710312
chr18 51860816 51860830 RXRG JASPAR yes 42710313
chr18 51860816 51860831 HNF4G JASPAR yes 42710314
chr18 51860816 51860831 NR2C2 JASPAR yes 42710315
chr18 51860841 51860858 RARA JASPAR yes 42710316
chr18 51860852 51860855 MYB TRANSFAC yes 42710317
chr18 51860852 51860866 RXRB JASPAR yes 42710318
chr18 51860852 51860866 RXRG JASPAR yes 42710319
chr18 51860852 51860867 NR2C2 JASPAR yes 42710320
chr18 51860859 51860873 RXRB JASPAR yes 42710321
chr18 51860867 51860870 MYB TRANSFAC yes 42710322
chr18 51860882 51860900 SRF JASPAR yes 42710323
chr18 51860885 51860897 SRF JASPAR yes 42710324
chr18 51860886 51860896 HOXA13 JASPAR yes 42710325
chr18 51860886 51860896 HOXB13 JASPAR yes 42710326
chr18 51860886 51860896 HOXD13 JASPAR yes 42710327
chr18 51860886 51860897 HOXA10 JASPAR yes 42710328
chr18 51860887 51860896 CDX1 JASPAR yes 42710329
chr18 51860887 51860898 CDX2 JASPAR yes 42710330
chr18 51860893 51860897 ESR1 TRANSFAC yes 42710331
chr18 51860909 51860915 LEF1 TRANSFAC yes 42710332
chr18 51860909 51860915 SOX10 JASPAR yes 42710333
chr18 51860909 51860924 FOXP1 JASPAR yes 42710334
chr18 51860910 51860921 FOXP2 JASPAR yes 42710335
chr18 51860910 51860924 FOXF2 JASPAR yes 42710336
chr18 51860911 51860919 FOXG1 JASPAR yes 42710337
chr18 51860911 51860919 FOXO3 JASPAR yes 42710338
chr18 51860913 51860921 GATA3 JASPAR yes 42710339
chr18 51860934 51860940 NFIC JASPAR yes 42710340
chr18 51860954 51860969 HNF4A JASPAR yes 42710341
chr18 51860955 51860970 HNF4G JASPAR yes 42710342
chr18 51860956 51860969 POU2F2 JASPAR yes 42710343
chr18 51860964 51860968 YY1 TRANSFAC yes 42710344
SNP sites on vista27492[chr18:51860775-51860976]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 51860831 rs79559367 C G,T
HNF4G NR2C2
5263783
chr18 51860925 rs150791171 G A no 5263784
chr18 51860970 rs181244146 G C
HNF4G
5263785
Genes possibly regulated by vista27492[chr18:51860775-51860976]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 51795774 51847636 + POLI ENSG00000101751.6 51795774 0.79 0.99 16596 34999
chr18 51850728 51884334 - STARD6 ENSG00000174448.4 51884334 0.94 1.0 16597 76642
chr18 51884287 51911588 + C18orf54 ENSG00000166845.9 51884287 0.78 0.98 16598 76689
Expression level of Genes
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miRNAs possibly regulated by vista27492[chr18:51860775-51860976]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results