EnhancerDB
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  3. vista27496[chr18:52401143-52401540]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27496[chr18:52401143-52401540]
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Tissue distribution of vista27496
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Transcription factor that possibly regulate vista27496[chr18:52401143-52401540]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 52401260 52401660 FOS UCSC Txn Factor no Conserved 108337237
chr18 52401347 52401638 JUND UCSC Txn Factor no Conserved 108337246
chr18 52401133 52401148 HNF1A JASPAR yes 42710438
chr18 52401133 52401148 HNF1A JASPAR yes 110724695
chr18 52401162 52401177 MEF2C JASPAR yes 42710439
chr18 52401162 52401177 MEF2C JASPAR yes 110724697
chr18 52401163 52401178 MEF2A JASPAR yes 42710440
chr18 52401163 52401178 MEF2A JASPAR yes 110724698
chr18 52401164 52401176 MEF2A JASPAR yes 42710441
chr18 52401164 52401176 MEF2B JASPAR yes 42710442
chr18 52401164 52401176 MEF2D JASPAR yes 42710443
chr18 52401164 52401176 MEF2A JASPAR yes 110724699
chr18 52401164 52401176 MEF2B JASPAR yes 110724700
chr18 52401164 52401176 MEF2D JASPAR yes 110724701
chr18 52401165 52401175 MEF2A JASPAR yes 42710444
chr18 52401165 52401175 MEF2A JASPAR yes 110724702
chr18 52401169 52401181 FOXI1 JASPAR yes 42710445
chr18 52401169 52401181 FOXI1 JASPAR yes 110724703
chr18 52401172 52401176 YY1 TRANSFAC yes 42710446
chr18 52401172 52401176 YY1 TRANSFAC yes 110724704
chr18 52401187 52401201 JUN JASPAR yes 42710447
chr18 52401187 52401201 JUN JASPAR yes 110724705
chr18 52401190 52401201 FOSL2 JASPAR yes 42710448
chr18 52401190 52401201 JUNB JASPAR yes 42710449
chr18 52401190 52401201 FOSL2 JASPAR yes 110724706
chr18 52401190 52401201 JUNB JASPAR yes 110724707
chr18 52401191 52401202 FOS JASPAR yes 42710450
chr18 52401191 52401202 FOSL1 JASPAR yes 42710451
chr18 52401191 52401202 JUND JASPAR yes 42710452
chr18 52401191 52401202 FOS JASPAR yes 110724708
chr18 52401191 52401202 FOSL1 JASPAR yes 110724709
chr18 52401191 52401202 JUND JASPAR yes 110724710
chr18 52401192 52401206 JUN JASPAR yes 42710453
chr18 52401192 52401206 JUN JASPAR yes 110724711
chr18 52401193 52401200 JUN TRANSFAC yes 42710454
chr18 52401193 52401200 JUN TRANSFAC yes 110724712
chr18 52401199 52401219 TBX19 JASPAR yes 42710455
chr18 52401199 52401219 TBX19 JASPAR yes 110724713
chr18 52401201 52401217 T JASPAR yes 42710456
chr18 52401201 52401217 T JASPAR yes 110724714
chr18 52401215 52401219 YY1 TRANSFAC yes 42710457
chr18 52401215 52401219 YY1 TRANSFAC yes 110724715
chr18 52401224 52401228 YY1 TRANSFAC yes 42710458
chr18 52401224 52401228 YY1 TRANSFAC yes 110724716
chr18 52401253 52401258 ETS2 TRANSFAC yes 42710459
chr18 52401253 52401258 ETS2 TRANSFAC yes 110724717
chr18 52401267 52401273 GATA3 JASPAR yes 42710460
chr18 52401267 52401273 GATA3 JASPAR yes 110724718
chr18 52401284 52401290 GATA3 JASPAR yes 42710461
chr18 52401284 52401290 GATA3 JASPAR yes 110724719
chr18 52401301 52401308 NKX3-1 JASPAR yes 42710462
chr18 52401301 52401308 NKX3-1 JASPAR yes 110724720
chr18 52401315 52401329 IRF7 JASPAR yes 42710463
chr18 52401315 52401329 IRF7 JASPAR yes 110724721
chr18 52401317 52401332 STAT2 JASPAR yes 42710464
chr18 52401317 52401332 STAT2 JASPAR yes 110724722
chr18 52401323 52401332 SRY JASPAR yes 42710465
chr18 52401323 52401332 SRY JASPAR yes 110724723
chr18 52401333 52401345 YY1 JASPAR yes 42710466
chr18 52401333 52401345 YY1 JASPAR yes 110724724
chr18 52401357 52401367 GSX2 JASPAR yes 42710467
chr18 52401357 52401367 GSX2 JASPAR yes 110724725
chr18 52401358 52401366 BARX1 JASPAR yes 42710468
chr18 52401358 52401366 BARX1 JASPAR yes 110724726
chr18 52401359 52401370 PHOX2A JASPAR yes 42710469
chr18 52401359 52401370 PROP1 JASPAR yes 42710470
chr18 52401359 52401370 PHOX2A JASPAR yes 110724727
chr18 52401359 52401370 PROP1 JASPAR yes 110724728
chr18 52401374 52401389 JUND JASPAR yes 42710471
chr18 52401374 52401389 JUND JASPAR yes 110724729
chr18 52401375 52401388 JUN JASPAR yes 42710472
chr18 52401375 52401388 JUN JASPAR yes 110724730
chr18 52401376 52401383 JUN TRANSFAC yes 42710473
chr18 52401376 52401383 JUN TRANSFAC yes 110724731
chr18 52401382 52401386 YY1 TRANSFAC yes 42710474
chr18 52401382 52401386 YY1 TRANSFAC yes 110724732
chr18 52401394 52401407 DUXA JASPAR yes 42710475
chr18 52401394 52401407 DUXA JASPAR yes 110724733
chr18 52401394 52401410 POU4F3 JASPAR yes 42710476
chr18 52401394 52401410 POU4F3 JASPAR yes 110724734
chr18 52401395 52401406 DUX4 JASPAR yes 42710477
chr18 52401395 52401406 DUX4 JASPAR yes 110724735
chr18 52401422 52401435 NR2F1 JASPAR yes 42710478
chr18 52401422 52401435 NR2F1 JASPAR yes 110724736
chr18 52401423 52401431 CREB1 JASPAR yes 42710479
chr18 52401423 52401431 CREB1 JASPAR yes 110724737
chr18 52401426 52401430 ESR1 TRANSFAC yes 42710480
chr18 52401426 52401430 ESR1 TRANSFAC yes 110724738
chr18 52401477 52401497 PPARG JASPAR yes 42710481
chr18 52401477 52401497 PPARG JASPAR yes 110724739
chr18 52401482 52401496 JUN JASPAR yes 42710482
chr18 52401482 52401496 JUN JASPAR yes 110724740
chr18 52401484 52401495 BATF JASPAR yes 42710483
chr18 52401484 52401495 BATF JASPAR yes 110724741
chr18 52401485 52401496 FOSL2 JASPAR yes 42710484
chr18 52401485 52401496 JUNB JASPAR yes 42710485
chr18 52401485 52401496 FOSL2 JASPAR yes 110724742
chr18 52401485 52401496 JUNB JASPAR yes 110724743
chr18 52401486 52401497 FOS JASPAR yes 42710486
chr18 52401486 52401497 FOSL1 JASPAR yes 42710487
chr18 52401486 52401497 JUND JASPAR yes 42710488
chr18 52401486 52401497 NFE2 JASPAR yes 42710489
chr18 52401486 52401497 FOS JASPAR yes 110724744
chr18 52401486 52401497 FOSL1 JASPAR yes 110724745
chr18 52401486 52401497 JUND JASPAR yes 110724746
chr18 52401486 52401497 NFE2 JASPAR yes 110724747
chr18 52401487 52401496 JDP2 JASPAR yes 42710490
chr18 52401487 52401496 JDP2 JASPAR yes 110724748
chr18 52401487 52401498 FOSL2 JASPAR yes 42710491
chr18 52401487 52401498 JUNB JASPAR yes 42710492
chr18 52401487 52401498 FOSL2 JASPAR yes 110724749
chr18 52401487 52401498 JUNB JASPAR yes 110724750
chr18 52401487 52401501 JUN JASPAR yes 42710493
chr18 52401487 52401501 JUN JASPAR yes 110724751
SNP sites on vista27496[chr18:52401143-52401540]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 52401350 rs531014255 C A,G
FOS JUND
5264819
chr18 52401511 rs539114343 G A
FOS JUND
5264820
Genes possibly regulated by vista27496[chr18:52401143-52401540]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 52385091 52562747 + RAB27B ENSG00000041353.5 52385091 0.83 0.93 16600 83948
Expression level of Genes
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miRNAs possibly regulated by vista27496[chr18:52401143-52401540]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results