EnhancerDB
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  3. vista27499[chr18:52473282-52473502]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27499[chr18:52473282-52473502]
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Tissue distribution of vista27499
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Transcription factor that possibly regulate vista27499[chr18:52473282-52473502]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 52473149 52473699 GATA2 UCSC Txn Factor no Conserved 108337294
chr18 52473266 52473582 EP300 UCSC Txn Factor no Conserved 108337299
chr18 52473276 52473288 PBX1 JASPAR yes 42710537
chr18 52473276 52473288 PBX1 JASPAR yes 110730984
chr18 52473286 52473293 NKX3-1 JASPAR yes 42710538
chr18 52473286 52473293 NKX3-1 JASPAR yes 110730985
chr18 52473296 52473300 YY1 TRANSFAC yes 42710539
chr18 52473296 52473300 YY1 TRANSFAC yes 110730986
chr18 52473311 52473325 EBF1 JASPAR yes 42710540
chr18 52473311 52473325 EBF1 JASPAR yes 110730987
chr18 52473318 52473328 RELA JASPAR yes 42710541
chr18 52473318 52473328 REL JASPAR yes 42710542
chr18 52473318 52473328 RELA JASPAR yes 110730988
chr18 52473318 52473328 REL JASPAR yes 110730989
chr18 52473318 52473329 NFKB1 JASPAR yes 42710543
chr18 52473318 52473329 NFKB1 JASPAR yes 110730990
chr18 52473321 52473326 H4TF1 TRANSFAC yes 42710544
chr18 52473321 52473326 H4TF1 TRANSFAC yes 110730991
chr18 52473322 52473330 FEV JASPAR yes 42710545
chr18 52473322 52473330 FEV JASPAR yes 110730992
chr18 52473323 52473334 STAT1 JASPAR yes 42710546
chr18 52473323 52473334 STAT1 JASPAR yes 110730993
chr18 52473324 52473329 ETS2 TRANSFAC yes 42710547
chr18 52473324 52473329 ETS2 TRANSFAC yes 110730994
chr18 52473336 52473340 TEAD2 TRANSFAC yes 42710548
chr18 52473336 52473340 TEAD2 TRANSFAC yes 110730995
chr18 52473336 52473341 TBP TRANSFAC yes 42710549
chr18 52473336 52473341 TBP TRANSFAC yes 110730996
chr18 52473336 52473342 TFIID TRANSFAC yes 42710550
chr18 52473336 52473342 TFIID TRANSFAC yes 110730997
chr18 52473351 52473372 IRF1 JASPAR yes 42710551
chr18 52473351 52473372 IRF1 JASPAR yes 110730998
chr18 52473354 52473367 ELF1 JASPAR yes 42710552
chr18 52473354 52473367 ELF1 JASPAR yes 110730999
chr18 52473354 52473368 SPI1 JASPAR yes 42710553
chr18 52473354 52473368 SPIC JASPAR yes 42710554
chr18 52473354 52473368 SPI1 JASPAR yes 110731000
chr18 52473354 52473368 SPIC JASPAR yes 110731001
chr18 52473356 52473374 SRF JASPAR yes 42710555
chr18 52473356 52473374 SRF JASPAR yes 110731002
chr18 52473357 52473362 ETS2 TRANSFAC yes 42710556
chr18 52473357 52473362 ETS2 TRANSFAC yes 110731003
chr18 52473363 52473369 TCF4 TRANSFAC yes 42710557
chr18 52473363 52473369 TCF4 TRANSFAC yes 110731004
chr18 52473374 52473384 GCM2 JASPAR yes 42710558
chr18 52473374 52473384 GCM2 JASPAR yes 110731005
chr18 52473377 52473388 FLI1 JASPAR yes 42710559
chr18 52473377 52473388 FLI1 JASPAR yes 110731006
chr18 52473378 52473388 ERF JASPAR yes 42710560
chr18 52473378 52473388 ERG JASPAR yes 42710561
chr18 52473378 52473388 ETS1 JASPAR yes 42710562
chr18 52473378 52473388 ERF JASPAR yes 110731007
chr18 52473378 52473388 ERG JASPAR yes 110731008
chr18 52473378 52473388 ETS1 JASPAR yes 110731009
chr18 52473412 52473422 OLIG2 JASPAR yes 42710563
chr18 52473412 52473422 OLIG3 JASPAR yes 42710564
chr18 52473412 52473422 OLIG2 JASPAR yes 110731010
chr18 52473412 52473422 OLIG3 JASPAR yes 110731011
chr18 52473420 52473427 MEIS1 JASPAR yes 42710565
chr18 52473420 52473427 MEIS1 JASPAR yes 110731012
chr18 52473420 52473428 MEIS2 JASPAR yes 42710566
chr18 52473420 52473428 MEIS3 JASPAR yes 42710567
chr18 52473420 52473428 MEIS2 JASPAR yes 110731013
chr18 52473420 52473428 MEIS3 JASPAR yes 110731014
chr18 52473432 52473446 GATA2 JASPAR yes 42710568
chr18 52473432 52473446 GATA2 JASPAR yes 110731015
chr18 52473434 52473442 GATA3 JASPAR yes 42710569
chr18 52473434 52473442 GATA3 JASPAR yes 110731016
chr18 52473445 52473452 NKX3-1 JASPAR yes 42710570
chr18 52473445 52473452 NKX3-1 JASPAR yes 110731017
chr18 52473446 52473454 FOXC1 JASPAR yes 42710571
chr18 52473446 52473454 FOXC1 JASPAR yes 110731018
chr18 52473458 52473462 ESR1 TRANSFAC yes 42710572
chr18 52473458 52473462 ESR1 TRANSFAC yes 110731019
chr18 52473463 52473477 STAT1 JASPAR yes 42710573
chr18 52473463 52473477 STAT1 JASPAR yes 110731020
chr18 52473463 52473478 STAT2 JASPAR yes 42710574
chr18 52473463 52473478 STAT2 JASPAR yes 110731021
chr18 52473481 52473486 GATA1 TRANSFAC yes 42710575
chr18 52473481 52473486 GATA1 TRANSFAC yes 110731022
chr18 52473484 52473495 FOS JASPAR yes 42710576
chr18 52473484 52473495 FOS JASPAR yes 110731023
chr18 52473485 52473496 FOSL2 JASPAR yes 42710577
chr18 52473485 52473496 JUNB JASPAR yes 42710578
chr18 52473485 52473496 FOSL2 JASPAR yes 110731024
chr18 52473485 52473496 JUNB JASPAR yes 110731025
chr18 52473485 52473499 JUN JASPAR yes 42710579
chr18 52473485 52473499 JUN JASPAR yes 110731026
chr18 52473486 52473492 JUN TRANSFAC yes 42710580
chr18 52473486 52473492 JUN TRANSFAC yes 110731027
SNP sites on vista27499[chr18:52473282-52473502]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 52473499 rs191224149 T C
EP300 GATA2 JUN
5265322
Genes possibly regulated by vista27499[chr18:52473282-52473502]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 52385091 52562747 + RAB27B ENSG00000041353.5 52385091 0.83 0.93 16600 11809
Expression level of Genes
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miRNAs possibly regulated by vista27499[chr18:52473282-52473502]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results