EnhancerDB
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  3. vista27505[chr18:52698891-52699047]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27505[chr18:52698891-52699047]
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Tissue distribution of vista27505
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Transcription factor that possibly regulate vista27505[chr18:52698891-52699047]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 52698910 52698925 MEF2A JASPAR yes 42710706
chr18 52698910 52698925 MEF2A JASPAR yes 110737890
chr18 52698912 52698924 MEF2A JASPAR yes 42710707
chr18 52698912 52698924 MEF2D JASPAR yes 42710708
chr18 52698912 52698924 MEF2A JASPAR yes 110737891
chr18 52698912 52698924 MEF2D JASPAR yes 110737892
chr18 52698913 52698923 MEF2A JASPAR yes 42710709
chr18 52698913 52698923 MEF2A JASPAR yes 110737893
chr18 52698914 52698918 YY1 TRANSFAC yes 42710710
chr18 52698914 52698918 YY1 TRANSFAC yes 110737894
chr18 52698932 52698938 HiNF-A TRANSFAC yes 42710711
chr18 52698932 52698938 HiNF-A TRANSFAC yes 110737895
chr18 52698962 52698970 MGA JASPAR yes 42710712
chr18 52698962 52698970 TBX15 JASPAR yes 42710713
chr18 52698962 52698970 TBX1 JASPAR yes 42710714
chr18 52698962 52698970 TBX4 JASPAR yes 42710715
chr18 52698962 52698970 TBX5 JASPAR yes 42710716
chr18 52698962 52698970 MGA JASPAR yes 110737896
chr18 52698962 52698970 TBX15 JASPAR yes 110737897
chr18 52698962 52698970 TBX1 JASPAR yes 110737898
chr18 52698962 52698970 TBX4 JASPAR yes 110737899
chr18 52698962 52698970 TBX5 JASPAR yes 110737900
chr18 52698968 52698976 TBX5 JASPAR yes 42710717
chr18 52698968 52698976 TBX5 JASPAR yes 110737901
chr18 52698978 52698982 YY1 TRANSFAC yes 42710718
chr18 52698978 52698982 YY1 TRANSFAC yes 110737902
chr18 52698983 52698991 MEIS2 JASPAR yes 42710719
chr18 52698983 52698991 MEIS2 JASPAR yes 110737903
chr18 52698984 52698988 NFE TRANSFAC yes 42710720
chr18 52698984 52698988 NFE TRANSFAC yes 110737904
chr18 52698984 52698991 MEIS1 JASPAR yes 42710721
chr18 52698984 52698991 MEIS1 JASPAR yes 110737905
chr18 52698989 52698994 ETS2 TRANSFAC yes 42710722
chr18 52698989 52698994 ETS2 TRANSFAC yes 110737906
chr18 52698989 52698997 FEV JASPAR yes 42710723
chr18 52698989 52698997 FEV JASPAR yes 110737907
chr18 52699003 52699015 YY1 JASPAR yes 42710724
chr18 52699003 52699015 YY1 JASPAR yes 110737908
chr18 52699008 52699027 RFX2 JASPAR yes 42710725
chr18 52699008 52699027 RFX2 JASPAR yes 110737909
chr18 52699012 52699020 FOXO3 JASPAR yes 42710726
chr18 52699012 52699020 FOXO3 JASPAR yes 110737910
chr18 52699012 52699022 NFATC3 JASPAR yes 42710727
chr18 52699012 52699022 NFATC3 JASPAR yes 110737911
chr18 52699019 52699027 MEIS2 JASPAR yes 42710728
chr18 52699019 52699027 MEIS3 JASPAR yes 42710729
chr18 52699019 52699027 MEIS2 JASPAR yes 110737912
chr18 52699019 52699027 MEIS3 JASPAR yes 110737913
chr18 52699021 52699036 FOXP1 JASPAR yes 42710730
chr18 52699021 52699036 FOXP1 JASPAR yes 110737914
chr18 52699024 52699035 FOXP2 JASPAR yes 42710731
chr18 52699024 52699035 FOXP2 JASPAR yes 110737915
chr18 52699025 52699033 FOXO3 JASPAR yes 42710732
chr18 52699025 52699033 FOXO3 JASPAR yes 110737916
chr18 52699026 52699035 SRY JASPAR yes 42710733
chr18 52699026 52699035 SRY JASPAR yes 110737917
chr18 52699026 52699047 IRF1 JASPAR yes 42710734
chr18 52699026 52699047 IRF1 JASPAR yes 110737918
chr18 52699028 52699048 RREB1 JASPAR yes 42710735
chr18 52699028 52699048 RREB1 JASPAR yes 110737919
chr18 52699029 52699043 IRF7 JASPAR yes 42710736
chr18 52699029 52699043 IRF7 JASPAR yes 110737920
chr18 52699030 52699036 SOX10 JASPAR yes 42710737
chr18 52699030 52699036 SOX10 JASPAR yes 110737921
chr18 52699031 52699043 IRF1 JASPAR yes 42710738
chr18 52699031 52699043 IRF1 JASPAR yes 110737922
chr18 52699031 52699046 FOXP1 JASPAR yes 42710739
chr18 52699031 52699046 FOXP1 JASPAR yes 110737923
chr18 52699031 52699052 IRF1 JASPAR yes 42710740
chr18 52699031 52699052 IRF1 JASPAR yes 110737924
chr18 52699033 52699053 RREB1 JASPAR yes 42710741
chr18 52699033 52699053 RREB1 JASPAR yes 110737925
chr18 52699036 52699048 IRF1 JASPAR yes 42710742
chr18 52699036 52699048 IRF1 JASPAR yes 110737926
chr18 52699036 52699051 FOXP1 JASPAR yes 42710743
chr18 52699036 52699051 FOXP1 JASPAR yes 110737927
chr18 52699039 52699053 IRF7 JASPAR yes 42710744
chr18 52699039 52699053 IRF7 JASPAR yes 110737928
SNP sites on vista27505[chr18:52698891-52699047]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 52698985 rs78431792 C T
MEIS1 MEIS2 NFE
5266016
chr18 52699032 rs533214215 C A
FOXO3 FOXP1 FOXP2 IRF1 IRF7 RREB1 SOX10 SRY
5266017
Genes possibly regulated by vista27505[chr18:52698891-52699047]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 52568740 52626739 - CCDC68 ENSG00000166510.9 52626739 0.92 0.99 16601 27848
Expression level of Genes
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miRNAs possibly regulated by vista27505[chr18:52698891-52699047]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results