EnhancerDB
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  3. vista27509[chr18:53004994-53005474]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27509[chr18:53004994-53005474]
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Tissue distribution of vista27509
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Transcription factor that possibly regulate vista27509[chr18:53004994-53005474]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 53005012 53005026 EBF1 JASPAR yes 42710932
chr18 53005012 53005026 EBF1 JASPAR yes 110761808
chr18 53005058 53005073 NR2C2 JASPAR yes 42710933
chr18 53005058 53005073 NR2C2 JASPAR yes 110761809
chr18 53005066 53005081 FOXA1 JASPAR yes 42710934
chr18 53005066 53005081 FOXA1 JASPAR yes 110761810
chr18 53005067 53005082 FOXP1 JASPAR yes 42710935
chr18 53005067 53005082 FOXP1 JASPAR yes 110761811
chr18 53005068 53005079 FOXP2 JASPAR yes 42710936
chr18 53005068 53005079 FOXP2 JASPAR yes 110761812
chr18 53005068 53005080 FOXC2 JASPAR yes 42710937
chr18 53005068 53005080 FOXC2 JASPAR yes 110761813
chr18 53005068 53005082 FOXF2 JASPAR yes 42710938
chr18 53005068 53005082 FOXF2 JASPAR yes 110761814
chr18 53005069 53005077 FOXD1 JASPAR yes 42710939
chr18 53005069 53005077 FOXO3 JASPAR yes 42710940
chr18 53005069 53005077 FOXD1 JASPAR yes 110761815
chr18 53005069 53005077 FOXO3 JASPAR yes 110761816
chr18 53005070 53005077 FOXD2 JASPAR yes 42710941
chr18 53005070 53005077 FOXI1 JASPAR yes 42710942
chr18 53005070 53005077 FOXL1 JASPAR yes 42710943
chr18 53005070 53005077 FOXO4 JASPAR yes 42710944
chr18 53005070 53005077 FOXO6 JASPAR yes 42710945
chr18 53005070 53005077 FOXP3 JASPAR yes 42710946
chr18 53005070 53005077 FOXD2 JASPAR yes 110761817
chr18 53005070 53005077 FOXI1 JASPAR yes 110761818
chr18 53005070 53005077 FOXL1 JASPAR yes 110761819
chr18 53005070 53005077 FOXO4 JASPAR yes 110761820
chr18 53005070 53005077 FOXO6 JASPAR yes 110761821
chr18 53005070 53005077 FOXP3 JASPAR yes 110761822
chr18 53005070 53005078 FOXO3 JASPAR yes 42710947
chr18 53005070 53005078 FOXO3 JASPAR yes 110761823
chr18 53005070 53005081 FOXA1 JASPAR yes 42710948
chr18 53005070 53005081 FOXA1 JASPAR yes 110761824
chr18 53005095 53005101 YY1 JASPAR yes 42710949
chr18 53005095 53005101 YY1 JASPAR yes 110761825
chr18 53005114 53005120 SOX10 JASPAR yes 42710950
chr18 53005114 53005120 SOX10 JASPAR yes 110761826
chr18 53005129 53005148 REST JASPAR yes 42710951
chr18 53005129 53005148 REST JASPAR yes 110761827
chr18 53005138 53005150 TAL1 JASPAR yes 42710952
chr18 53005138 53005150 TAL1 JASPAR yes 110761828
chr18 53005139 53005152 ZBTB18 JASPAR yes 42710953
chr18 53005139 53005152 ZBTB18 JASPAR yes 110761829
chr18 53005140 53005150 FIGLA JASPAR yes 42710954
chr18 53005140 53005150 MSC JASPAR yes 42710955
chr18 53005140 53005150 MYF6 JASPAR yes 42710956
chr18 53005140 53005150 TFAP4 JASPAR yes 42710957
chr18 53005140 53005150 FIGLA JASPAR yes 110761830
chr18 53005140 53005150 MSC JASPAR yes 110761831
chr18 53005140 53005150 MYF6 JASPAR yes 110761832
chr18 53005140 53005150 TFAP4 JASPAR yes 110761833
chr18 53005140 53005152 TAL1 JASPAR yes 42710958
chr18 53005140 53005152 TAL1 JASPAR yes 110761834
chr18 53005157 53005177 RREB1 JASPAR yes 42710959
chr18 53005157 53005177 RREB1 JASPAR yes 110761835
chr18 53005158 53005172 ONECUT2 JASPAR yes 42710960
chr18 53005158 53005172 ONECUT2 JASPAR yes 110761836
chr18 53005159 53005170 FOXH1 JASPAR yes 42710961
chr18 53005159 53005170 FOXH1 JASPAR yes 110761837
chr18 53005179 53005193 SPIC JASPAR yes 42710962
chr18 53005179 53005193 SPIC JASPAR yes 110761838
chr18 53005196 53005199 MYB TRANSFAC yes 42710963
chr18 53005196 53005199 MYB TRANSFAC yes 110761839
chr18 53005220 53005224 LFA1 TRANSFAC yes 42710964
chr18 53005220 53005224 LFA1 TRANSFAC yes 110761840
chr18 53005226 53005240 RXRB JASPAR yes 42710965
chr18 53005226 53005240 RXRG JASPAR yes 42710966
chr18 53005226 53005240 RXRB JASPAR yes 110761841
chr18 53005226 53005240 RXRG JASPAR yes 110761842
chr18 53005226 53005241 NR2C2 JASPAR yes 42710967
chr18 53005226 53005241 NR2C2 JASPAR yes 110761843
chr18 53005239 53005254 MEF2C JASPAR yes 42710968
chr18 53005239 53005254 MEF2C JASPAR yes 110761844
chr18 53005243 53005249 TBP TRANSFAC yes 42710969
chr18 53005243 53005249 TBP TRANSFAC yes 110761845
chr18 53005262 53005275 SMAD2 JASPAR yes 42710970
chr18 53005262 53005275 SMAD2 JASPAR yes 110761846
chr18 53005272 53005282 NFIA JASPAR yes 42710971
chr18 53005272 53005282 NFIA JASPAR yes 110761847
chr18 53005274 53005280 NFIC JASPAR yes 42710972
chr18 53005274 53005280 NFIC JASPAR yes 110761848
chr18 53005287 53005301 SPI1 JASPAR yes 42710973
chr18 53005287 53005301 SPIC JASPAR yes 42710974
chr18 53005287 53005301 SPI1 JASPAR yes 110761849
chr18 53005287 53005301 SPIC JASPAR yes 110761850
chr18 53005288 53005301 ELF1 JASPAR yes 42710975
chr18 53005288 53005301 ELF1 JASPAR yes 110761851
chr18 53005289 53005302 ELF3 JASPAR yes 42710976
chr18 53005289 53005302 ELF3 JASPAR yes 110761852
chr18 53005290 53005301 ELF5 JASPAR yes 42710977
chr18 53005290 53005301 ELF5 JASPAR yes 110761853
chr18 53005291 53005302 FLI1 JASPAR yes 42710978
chr18 53005291 53005302 FLI1 JASPAR yes 110761854
chr18 53005292 53005297 ETS2 TRANSFAC yes 42710979
chr18 53005292 53005297 ETS2 TRANSFAC yes 110761855
chr18 53005292 53005300 FEV JASPAR yes 42710980
chr18 53005292 53005300 FEV JASPAR yes 110761856
chr18 53005293 53005300 SPI1 JASPAR yes 42710981
chr18 53005293 53005300 SPI1 JASPAR yes 110761857
chr18 53005295 53005307 MYBL1 JASPAR yes 42710982
chr18 53005295 53005307 MYBL1 JASPAR yes 110761858
chr18 53005297 53005312 HNF1A JASPAR yes 42710983
chr18 53005297 53005312 HNF1A JASPAR yes 110761859
chr18 53005298 53005310 HNF1B JASPAR yes 42710984
chr18 53005298 53005310 HNF1B JASPAR yes 110761860
chr18 53005298 53005311 HNF1B JASPAR yes 42710985
chr18 53005298 53005311 HNF1B JASPAR yes 110761861
chr18 53005300 53005303 MYB TRANSFAC yes 42710986
chr18 53005300 53005303 MYB TRANSFAC yes 110761862
chr18 53005330 53005337 JUN TRANSFAC yes 42710987
chr18 53005330 53005337 JUN TRANSFAC yes 110761863
chr18 53005338 53005343 H4TF1 TRANSFAC yes 42710988
chr18 53005338 53005343 H4TF1 TRANSFAC yes 110761864
chr18 53005366 53005375 NFIX JASPAR yes 42710989
chr18 53005366 53005375 NFIX JASPAR yes 110761865
chr18 53005368 53005374 NFIC JASPAR yes 42710990
chr18 53005368 53005374 NFIC JASPAR yes 110761866
chr18 53005391 53005395 YY1 TRANSFAC yes 42710991
chr18 53005391 53005395 YY1 TRANSFAC yes 110761867
chr18 53005396 53005400 YY1 TRANSFAC yes 42710992
chr18 53005396 53005400 YY1 TRANSFAC yes 110761868
chr18 53005410 53005425 MEF2C JASPAR yes 42710993
chr18 53005410 53005425 MEF2C JASPAR yes 110761869
chr18 53005411 53005426 MEF2A JASPAR yes 42710994
chr18 53005411 53005426 MEF2A JASPAR yes 110761870
chr18 53005425 53005431 NFE2 TRANSFAC yes 42710995
chr18 53005425 53005431 NFE2 TRANSFAC yes 110761871
chr18 53005431 53005436 MYC TRANSFAC yes 42710996
chr18 53005431 53005436 MYC TRANSFAC yes 110761872
chr18 53005471 53005483 HNF1B JASPAR yes 42710997
chr18 53005471 53005483 HNF1B JASPAR yes 110761873
SNP sites on vista27509[chr18:53004994-53005474]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 53005077 rs148495546 C T
FOXA1 FOXC2 FOXD1 FOXD2 FOXF2 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP1 FOXP2 FOXP3
5267827
chr18 53005109 rs576433907 A G no 5267828
chr18 53005277 rs142840510 C T
NFIA NFIC
5267829
chr18 53005366 rs186371604 T G
NFIX
5267830
chr18 53005409 rs55781162 G A no 5267831
chr18 53005415 rs200747320 C CA
MEF2A MEF2C
5267832
chr18 53005415 rs79700443 C CA
MEF2A MEF2C
5267833
chr18 53005429 rs117588571 C T
NFE2
5267834
chr18 53005443 rs575257389 G A no 5267835
Genes possibly regulated by vista27509[chr18:53004994-53005474]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27509[chr18:53004994-53005474]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results