EnhancerDB
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  3. vista27520[chr18:53180110-53180413]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27520[chr18:53180110-53180413]
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Tissue distribution of vista27520
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Transcription factor that possibly regulate vista27520[chr18:53180110-53180413]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 53180120 53180125 H4TF1 TRANSFAC yes 42711465
chr18 53180120 53180125 H4TF1 TRANSFAC yes 110782179
chr18 53180160 53180165 GATA2 JASPAR yes 42711466
chr18 53180160 53180165 GATA2 JASPAR yes 110782180
chr18 53180165 53180176 FOXA1 JASPAR yes 42711467
chr18 53180165 53180176 FOXA1 JASPAR yes 110782181
chr18 53180165 53180180 FOXA1 JASPAR yes 42711468
chr18 53180165 53180180 FOXA1 JASPAR yes 110782182
chr18 53180174 53180177 MYB TRANSFAC yes 42711469
chr18 53180174 53180177 MYB TRANSFAC yes 110782183
chr18 53180191 53180202 ESRRA JASPAR yes 42711470
chr18 53180191 53180202 ESRRB JASPAR yes 42711471
chr18 53180191 53180202 ESRRA JASPAR yes 110782184
chr18 53180191 53180202 ESRRB JASPAR yes 110782185
chr18 53180204 53180214 SREBF2 JASPAR yes 42711472
chr18 53180204 53180214 SREBF2 JASPAR yes 110782186
chr18 53180218 53180221 MYB TRANSFAC yes 42711473
chr18 53180218 53180221 MYB TRANSFAC yes 110782187
chr18 53180225 53180228 MYB TRANSFAC yes 42711474
chr18 53180225 53180228 MYB TRANSFAC yes 110782188
chr18 53180238 53180243 GATA1 TRANSFAC yes 42711475
chr18 53180238 53180243 GATA1 TRANSFAC yes 110782189
chr18 53180254 53180266 MEF2A JASPAR yes 42711476
chr18 53180254 53180266 MEF2D JASPAR yes 42711477
chr18 53180254 53180266 MEF2A JASPAR yes 110782190
chr18 53180254 53180266 MEF2D JASPAR yes 110782191
chr18 53180266 53180276 REL JASPAR yes 42711478
chr18 53180266 53180276 REL JASPAR yes 110782192
chr18 53180281 53180296 LEF1 JASPAR yes 42711479
chr18 53180281 53180296 LEF1 JASPAR yes 110782193
chr18 53180283 53180291 GATA3 JASPAR yes 42711480
chr18 53180283 53180291 GATA3 JASPAR yes 110782194
chr18 53180291 53180295 LFA1 TRANSFAC yes 42711481
chr18 53180291 53180295 LFA1 TRANSFAC yes 110782195
chr18 53180291 53180310 CTCF JASPAR yes 42711482
chr18 53180291 53180310 CTCF JASPAR yes 110782196
chr18 53180292 53180304 YY1 JASPAR yes 42711483
chr18 53180292 53180304 YY1 JASPAR yes 110782197
chr18 53180293 53180305 TAL1 JASPAR yes 42711484
chr18 53180293 53180305 TAL1 JASPAR yes 110782198
chr18 53180306 53180311 H4TF1 TRANSFAC yes 42711485
chr18 53180306 53180311 H4TF1 TRANSFAC yes 110782199
chr18 53180311 53180315 NFE TRANSFAC yes 42711486
chr18 53180311 53180315 NFE TRANSFAC yes 110782200
chr18 53180333 53180342 NKX3-2 JASPAR yes 42711487
chr18 53180333 53180342 NKX3-2 JASPAR yes 110782201
chr18 53180336 53180345 HIC2 JASPAR yes 42711488
chr18 53180336 53180345 HIC2 JASPAR yes 110782202
chr18 53180339 53180343 LFA1 TRANSFAC yes 42711489
chr18 53180339 53180343 LFA1 TRANSFAC yes 110782203
chr18 53180342 53180346 YY1 TRANSFAC yes 42711490
chr18 53180342 53180346 YY1 TRANSFAC yes 110782204
chr18 53180349 53180361 POU2F1 JASPAR yes 42711491
chr18 53180349 53180361 POU2F1 JASPAR yes 110782205
chr18 53180350 53180362 POU3F1 JASPAR yes 42711492
chr18 53180350 53180362 POU3F2 JASPAR yes 42711493
chr18 53180350 53180362 POU3F1 JASPAR yes 110782206
chr18 53180350 53180362 POU3F2 JASPAR yes 110782207
chr18 53180350 53180363 POU2F2 JASPAR yes 42711494
chr18 53180350 53180363 POU2F2 JASPAR yes 110782208
chr18 53180351 53180359 POU2F1 TRANSFAC yes 42711495
chr18 53180351 53180359 POU2F1 TRANSFAC yes 110782209
chr18 53180351 53180360 POU3F4 JASPAR yes 42711496
chr18 53180351 53180360 POU5F1B JASPAR yes 42711497
chr18 53180351 53180360 POU3F4 JASPAR yes 110782210
chr18 53180351 53180360 POU5F1B JASPAR yes 110782211
chr18 53180352 53180359 POU2F1 TRANSFAC yes 42711498
chr18 53180352 53180359 POU2F2 TRANSFAC yes 42711499
chr18 53180352 53180359 POU2F1 TRANSFAC yes 110782212
chr18 53180352 53180359 POU2F2 TRANSFAC yes 110782213
chr18 53180360 53180369 ZEB1 JASPAR yes 42711500
chr18 53180360 53180369 ZEB1 JASPAR yes 110782214
chr18 53180363 53180368 USF2 TRANSFAC yes 42711501
chr18 53180363 53180368 USF2 TRANSFAC yes 110782215
chr18 53180398 53180409 NRL JASPAR yes 42711502
chr18 53180398 53180409 NRL JASPAR yes 110782216
chr18 53180406 53180416 ETV3 JASPAR yes 42711503
chr18 53180406 53180416 ETV3 JASPAR yes 110782217
chr18 53180413 53180417 H4TF2 TRANSFAC yes 42711504
chr18 53180413 53180417 H4TF2 TRANSFAC yes 110782218
SNP sites on vista27520[chr18:53180110-53180413]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 53180143 rs563492215 G A no 5269152
chr18 53180150 rs150915999 G A no 5269153
Genes possibly regulated by vista27520[chr18:53180110-53180413]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27520[chr18:53180110-53180413]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results