EnhancerDB
  1. Home
  2. Enhancers
  3. vista27523[chr18:53332836-53333181]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27523[chr18:53332836-53333181]
Back to top
Tissue distribution of vista27523
Back to top
Transcription factor that possibly regulate vista27523[chr18:53332836-53333181]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 53332849 53332862 POU2F2 JASPAR yes 42711595
chr18 53332849 53332863 POU1F1 JASPAR yes 42711596
chr18 53332850 53332862 POU3F1 JASPAR yes 42711597
chr18 53332850 53332862 POU3F2 JASPAR yes 42711598
chr18 53332850 53332863 POU3F3 JASPAR yes 42711599
chr18 53332851 53332855 YY1 TRANSFAC yes 42711600
chr18 53332851 53332863 POU2F1 JASPAR yes 42711601
chr18 53332852 53332859 POU2F1 TRANSFAC yes 42711602
chr18 53332852 53332859 POU2F2C TRANSFAC yes 42711603
chr18 53332852 53332859 POU2F2 TRANSFAC yes 42711604
chr18 53332852 53332860 POU2F1 TRANSFAC yes 42711605
chr18 53332852 53332861 POU3F4 JASPAR yes 42711606
chr18 53332852 53332861 POU5F1B JASPAR yes 42711607
chr18 53332865 53332869 TEAD2 TRANSFAC yes 42711608
chr18 53332867 53332870 MYB TRANSFAC yes 42711609
chr18 53332870 53332876 LEF1 TRANSFAC yes 42711610
chr18 53332870 53332876 SOX10 JASPAR yes 42711611
chr18 53332875 53332878 MYB TRANSFAC yes 42711612
chr18 53332886 53332904 NFYA JASPAR yes 42711613
chr18 53332889 53332905 NFYA JASPAR yes 42711614
chr18 53332891 53332901 ALX3 JASPAR yes 42711615
chr18 53332891 53332901 ESX1 JASPAR yes 42711616
chr18 53332891 53332901 GBX1 JASPAR yes 42711617
chr18 53332891 53332901 GBX2 JASPAR yes 42711618
chr18 53332891 53332901 GSX1 JASPAR yes 42711619
chr18 53332891 53332901 GSX2 JASPAR yes 42711620
chr18 53332891 53332901 HESX1 JASPAR yes 42711621
chr18 53332891 53332901 HOXB3 JASPAR yes 42711622
chr18 53332891 53332901 LBX2 JASPAR yes 42711623
chr18 53332891 53332901 LHX2 JASPAR yes 42711624
chr18 53332891 53332901 MIXL1 JASPAR yes 42711625
chr18 53332891 53332901 RAX JASPAR yes 42711626
chr18 53332892 53332900 BARX1 JASPAR yes 42711627
chr18 53332892 53332900 BSX JASPAR yes 42711628
chr18 53332892 53332900 EN1 JASPAR yes 42711629
chr18 53332892 53332900 ISX JASPAR yes 42711630
chr18 53332892 53332900 LHX9 JASPAR yes 42711631
chr18 53332892 53332900 MSX1 JASPAR yes 42711632
chr18 53332892 53332900 MSX2 JASPAR yes 42711633
chr18 53332892 53332900 PRRX1 JASPAR yes 42711634
chr18 53332892 53332900 RAX2 JASPAR yes 42711635
chr18 53332892 53332900 SHOX JASPAR yes 42711636
chr18 53332892 53332901 VENTX JASPAR yes 42711637
chr18 53332892 53332907 NFYB JASPAR yes 42711638
chr18 53332898 53332902 ESR1 TRANSFAC yes 42711639
chr18 53332906 53332921 NFYB JASPAR yes 42711640
chr18 53332908 53332924 NFYA JASPAR yes 42711641
chr18 53332909 53332927 NFYA JASPAR yes 42711642
chr18 53332910 53332922 PBX1 JASPAR yes 42711643
chr18 53332913 53332917 H1TF2 TRANSFAC yes 42711644
chr18 53332913 53332917 NFE TRANSFAC yes 42711645
chr18 53332913 53332917 SRF TRANSFAC yes 42711646
chr18 53332937 53332940 MYB TRANSFAC yes 42711647
chr18 53332940 53332946 LEF1 TRANSFAC yes 42711648
chr18 53332940 53332946 SOX10 JASPAR yes 42711649
chr18 53332945 53332948 MYB TRANSFAC yes 42711650
chr18 53332956 53332973 RARA JASPAR yes 42711651
chr18 53332956 53332974 NFYA JASPAR yes 42711652
chr18 53332959 53332975 NFYA JASPAR yes 42711653
chr18 53332962 53332977 NFYB JASPAR yes 42711654
chr18 53332964 53332969 NFY TRANSFAC yes 42711655
chr18 53332966 53332980 TLX1 JASPAR yes 42711656
chr18 53332971 53332977 SP1 TRANSFAC yes 42711657
chr18 53332971 53332981 SP1 JASPAR yes 42711658
chr18 53332971 53332981 ZNF740 JASPAR yes 42711659
chr18 53333010 53333023 POU2F2 JASPAR yes 42711660
chr18 53333010 53333024 POU1F1 JASPAR yes 42711661
chr18 53333011 53333022 FOXB1 JASPAR yes 42711662
chr18 53333011 53333023 POU3F1 JASPAR yes 42711663
chr18 53333011 53333023 POU3F2 JASPAR yes 42711664
chr18 53333012 53333016 YY1 TRANSFAC yes 42711665
chr18 53333012 53333024 POU2F1 JASPAR yes 42711666
chr18 53333013 53333022 POU3F4 JASPAR yes 42711667
chr18 53333013 53333022 POU5F1B JASPAR yes 42711668
chr18 53333014 53333022 FOXL1 JASPAR yes 42711669
chr18 53333029 53333041 FOXI1 JASPAR yes 42711670
chr18 53333032 53333047 NFYB JASPAR yes 42711671
chr18 53333034 53333050 NFYA JASPAR yes 42711672
chr18 53333035 53333053 NFYA JASPAR yes 42711673
chr18 53333036 53333039 MYB TRANSFAC yes 42711674
chr18 53333039 53333043 H1TF2 TRANSFAC yes 42711675
chr18 53333039 53333043 NFE TRANSFAC yes 42711676
chr18 53333039 53333043 SRF TRANSFAC yes 42711677
chr18 53333045 53333060 HSF1 JASPAR yes 42711678
chr18 53333061 53333065 YY1 TRANSFAC yes 42711679
chr18 53333068 53333083 HSF1 JASPAR yes 42711680
chr18 53333069 53333082 HSF1 JASPAR yes 42711681
chr18 53333073 53333088 HSF1 JASPAR yes 42711682
chr18 53333074 53333087 HSF1 JASPAR yes 42711683
chr18 53333074 53333087 HSF2 JASPAR yes 42711684
chr18 53333074 53333087 HSF4 JASPAR yes 42711685
chr18 53333084 53333087 MYB TRANSFAC yes 42711686
chr18 53333114 53333133 CTCF JASPAR yes 42711687
chr18 53333117 53333125 TBX15 JASPAR yes 42711688
chr18 53333124 53333136 TEAD1 JASPAR yes 42711689
chr18 53333126 53333136 TEAD1 JASPAR yes 42711690
chr18 53333126 53333136 TEAD4 JASPAR yes 42711691
chr18 53333127 53333135 TEAD3 JASPAR yes 42711692
chr18 53333131 53333152 IRF1 JASPAR yes 42711693
chr18 53333133 53333148 STAT2 JASPAR yes 42711694
chr18 53333135 53333147 IRF1 JASPAR yes 42711695
chr18 53333135 53333149 IRF7 JASPAR yes 42711696
chr18 53333135 53333150 IRF9 JASPAR yes 42711697
chr18 53333137 53333143 TCF4 TRANSFAC yes 42711698
chr18 53333137 53333152 FOXP1 JASPAR yes 42711699
chr18 53333138 53333147 SRY JASPAR yes 42711700
chr18 53333138 53333149 FOXP2 JASPAR yes 42711701
chr18 53333140 53333148 FOXO3 JASPAR yes 42711702
chr18 53333155 53333176 IRF1 JASPAR yes 42711703
chr18 53333156 53333177 IRF1 JASPAR yes 42711704
chr18 53333157 53333178 IRF1 JASPAR yes 42711705
chr18 53333158 53333179 IRF1 JASPAR yes 42711706
chr18 53333159 53333174 FOXP1 JASPAR yes 42711707
chr18 53333159 53333180 IRF1 JASPAR yes 42711708
chr18 53333160 53333175 FOXP1 JASPAR yes 42711709
chr18 53333161 53333176 FOXP1 JASPAR yes 42711710
chr18 53333162 53333177 FOXP1 JASPAR yes 42711711
chr18 53333163 53333178 FOXP1 JASPAR yes 42711712
chr18 53333164 53333179 FOXP1 JASPAR yes 42711713
chr18 53333165 53333180 FOXP1 JASPAR yes 42711714
chr18 53333166 53333181 FOXP1 JASPAR yes 42711715
SNP sites on vista27523[chr18:53332836-53333181]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 53332921 rs556952756 G C
NFYA NFYB PBX1
5269604
chr18 53332964 rs784229 T C
NFY NFYA NFYB RARA
5269605
chr18 53333002 rs147333986 G A no 5269606
chr18 53333061 rs141034831 G C
YY1
5269607
chr18 53333117 rs565255277 C G,T
CTCF TBX15
5269608
chr18 53333161 rs547533386 CT C
FOXP1 IRF1
5269609
chr18 53333161 rs772687806 CT C
FOXP1 IRF1
5269610
Genes possibly regulated by vista27523[chr18:53332836-53333181]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 52889562 53332018 - TCF4 ENSG00000196628.9 53332018 0.87 0.81 16602 99182
Expression level of Genes
Back to top
miRNAs possibly regulated by vista27523[chr18:53332836-53333181]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results