EnhancerDB
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  3. vista27541[chr18:54236366-54236540]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27541[chr18:54236366-54236540]
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Tissue distribution of vista27541
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Transcription factor that possibly regulate vista27541[chr18:54236366-54236540]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 54236367 54236378 NFE2L2 JASPAR yes 42712393
chr18 54236370 54236381 PROP1 JASPAR yes 42712394
chr18 54236373 54236388 MYBL2 JASPAR yes 42712395
chr18 54236393 54236405 HNF1B JASPAR yes 42712396
chr18 54236399 54236407 HOXA5 JASPAR yes 42712397
chr18 54236416 54236431 RUNX2 JASPAR yes 42712398
chr18 54236424 54236437 NFKB1 JASPAR yes 42712399
chr18 54236434 54236438 H1TF2 TRANSFAC yes 42712400
chr18 54236434 54236438 NFE TRANSFAC yes 42712401
chr18 54236434 54236438 SRF TRANSFAC yes 42712402
chr18 54236448 54236458 ELK1 JASPAR yes 42712403
chr18 54236452 54236458 ETS1 JASPAR yes 42712404
chr18 54236458 54236472 XBP1 JASPAR yes 42712405
chr18 54236459 54236473 CREB3 JASPAR yes 42712406
chr18 54236464 54236469 ATF1 TRANSFAC yes 42712407
chr18 54236486 54236501 FOXP1 JASPAR yes 42712408
chr18 54236487 54236498 FOXP2 JASPAR yes 42712409
chr18 54236489 54236497 FOXO3 JASPAR yes 42712410
chr18 54236500 54236509 NKX2-8 JASPAR yes 42712411
chr18 54236500 54236510 NKX2-3 JASPAR yes 42712412
chr18 54236508 54236512 YY1 TRANSFAC yes 42712413
chr18 54236532 54236536 NFE TRANSFAC yes 42712414
chr18 54236533 54236538 GATA2 JASPAR yes 42712415
SNP sites on vista27541[chr18:54236366-54236540]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista27541[chr18:54236366-54236540]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 54264439 54318831 - TXNL1 ENSG00000091164.8 54318831 0.75 0.99 16603 17709
chr18 54318574 54698828 + WDR7 ENSG00000091157.9 54318574 0.83 0.99 16604 17966
Expression level of Genes
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miRNAs possibly regulated by vista27541[chr18:54236366-54236540]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results