EnhancerDB
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  3. vista27542[chr18:54315219-54315467]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27542[chr18:54315219-54315467]
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Tissue distribution of vista27542
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Transcription factor that possibly regulate vista27542[chr18:54315219-54315467]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 54315221 54315227 SOX10 JASPAR yes 42712416
chr18 54315234 54315237 MYB TRANSFAC yes 42712417
chr18 54315241 54315248 SPIB JASPAR yes 42712418
chr18 54315256 54315262 SOX10 JASPAR yes 42712419
chr18 54315274 54315285 NFKB1 JASPAR yes 42712420
chr18 54315279 54315293 EBF1 JASPAR yes 42712421
chr18 54315280 54315291 EBF1 JASPAR yes 42712422
chr18 54315281 54315292 EBF1 JASPAR yes 42712423
chr18 54315287 54315305 NR3C1 JASPAR yes 42712424
chr18 54315315 54315327 INSM1 JASPAR yes 42712425
chr18 54315328 54315341 NFKB1 JASPAR yes 42712426
chr18 54315328 54315341 NFKB2 JASPAR yes 42712427
chr18 54315329 54315334 SP1 TRANSFAC yes 42712428
chr18 54315329 54315340 NFKB1 JASPAR yes 42712429
chr18 54315335 54315341 MZF1 JASPAR yes 42712430
chr18 54315340 54315352 TEAD1 JASPAR yes 42712431
chr18 54315342 54315352 TEAD1 JASPAR yes 42712432
chr18 54315342 54315352 TEAD4 JASPAR yes 42712433
chr18 54315355 54315365 RELA JASPAR yes 42712434
chr18 54315355 54315365 REL JASPAR yes 42712435
chr18 54315355 54315366 NFKB1 JASPAR yes 42712436
chr18 54315371 54315382 NFE2L2 JASPAR yes 42712437
chr18 54315374 54315385 BATF JASPAR yes 42712438
chr18 54315419 54315430 NFKB1 JASPAR yes 42712439
chr18 54315420 54315430 RELA JASPAR yes 42712440
chr18 54315420 54315430 REL JASPAR yes 42712441
chr18 54315423 54315438 ESR2 JASPAR yes 42712442
chr18 54315426 54315437 USF1 JASPAR yes 42712443
chr18 54315426 54315437 USF2 JASPAR yes 42712444
chr18 54315428 54315441 NR2F1 JASPAR yes 42712445
chr18 54315430 54315441 ESRRA JASPAR yes 42712446
chr18 54315432 54315442 RORA JASPAR yes 42712447
chr18 54315447 54315450 MYB TRANSFAC yes 42712448
SNP sites on vista27542[chr18:54315219-54315467]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 54315274 rs199721415 AAG A
NFKB1
5274070
chr18 54315276 rs487140 G A
NFKB1
5274071
chr18 54315279 rs567806627 G C
EBF1 NFKB1
5274072
chr18 54315290 rs535219402 G A
EBF1 NR3C1
5274073
chr18 54315339 rs628047 C A,G
MZF1 NFKB1 NFKB2
5274074
chr18 54315348 rs628062 A G
TEAD1 TEAD4
5274075
chr18 54315393 rs141548013 C G no 5274076
chr18 54315432 rs485365 G A
ESR2 ESRRA NR2F1 RORA USF1 USF2
5274077
Genes possibly regulated by vista27542[chr18:54315219-54315467]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 54264439 54318831 - TXNL1 ENSG00000091164.8 54318831 0.75 0.99 16603 96636
chr18 54318574 54698828 + WDR7 ENSG00000091157.9 54318574 0.83 0.99 16604 96893
Expression level of Genes
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miRNAs possibly regulated by vista27542[chr18:54315219-54315467]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results