EnhancerDB
  1. Home
  2. Enhancers
  3. vista27543[chr18:54327448-54327828]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27543[chr18:54327448-54327828]
Back to top
Tissue distribution of vista27543
Back to top
Transcription factor that possibly regulate vista27543[chr18:54327448-54327828]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 54327453 54327462 NFIX JASPAR yes 42712449
chr18 54327453 54327463 NFIA JASPAR yes 42712450
chr18 54327455 54327461 NFIC JASPAR yes 42712451
chr18 54327479 54327483 NFE TRANSFAC yes 42712452
chr18 54327480 54327485 GATA2 JASPAR yes 42712453
chr18 54327484 54327498 SPI1 JASPAR yes 42712454
chr18 54327507 54327525 NR3C1 JASPAR yes 42712455
chr18 54327523 54327540 BCL6B JASPAR yes 42712456
chr18 54327525 54327530 H4TF1 TRANSFAC yes 42712457
chr18 54327546 54327555 CDX1 JASPAR yes 42712458
chr18 54327555 54327560 TFAP2A TRANSFAC yes 42712459
chr18 54327555 54327561 MZF1 JASPAR yes 42712460
chr18 54327562 54327566 NFE TRANSFAC yes 42712461
chr18 54327562 54327569 MEIS1 JASPAR yes 42712462
chr18 54327606 54327620 FOXF2 JASPAR yes 42712463
chr18 54327611 54327619 FOXG1 JASPAR yes 42712464
chr18 54327629 54327635 HiNF-A TRANSFAC yes 42712465
chr18 54327630 54327648 NFYA JASPAR yes 42712466
chr18 54327636 54327651 NFYB JASPAR yes 42712467
chr18 54327645 54327658 POU2F2 JASPAR yes 42712468
chr18 54327646 54327650 YY1 TRANSFAC yes 42712469
chr18 54327647 54327659 POU2F1 JASPAR yes 42712470
chr18 54327648 54327662 IRF7 JASPAR yes 42712471
chr18 54327650 54327664 POU4F1 JASPAR yes 42712472
chr18 54327650 54327666 POU4F2 JASPAR yes 42712473
chr18 54327653 54327657 YY1 TRANSFAC yes 42712474
chr18 54327655 54327668 HSF1 JASPAR yes 42712475
chr18 54327689 54327696 NKX3-1 JASPAR yes 42712476
chr18 54327693 54327697 TEAD2 TRANSFAC yes 42712477
chr18 54327697 54327709 FOXI1 JASPAR yes 42712478
chr18 54327704 54327709 GATA2 JASPAR yes 42712479
chr18 54327704 54327722 SRF JASPAR yes 42712480
chr18 54327706 54327712 MZF1 JASPAR yes 42712481
chr18 54327719 54327733 ONECUT3 JASPAR yes 42712482
chr18 54327761 54327769 GATA3 JASPAR yes 42712483
chr18 54327768 54327773 GATA2 JASPAR yes 42712484
chr18 54327804 54327819 JUND JASPAR yes 42712485
chr18 54327805 54327818 DUXA JASPAR yes 42712486
chr18 54327806 54327817 DUX4 JASPAR yes 42712487
chr18 54327807 54327822 JUND JASPAR yes 42712488
chr18 54327808 54327821 JUN JASPAR yes 42712489
chr18 54327819 54327827 SP1 TRANSFAC yes 42712490
chr18 54327821 54327827 MAZ TRANSFAC yes 42712491
SNP sites on vista27543[chr18:54327448-54327828]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 54327519 rs619558 T A,G
NR3C1
5274104
chr18 54327656 rs624221 T A
HSF1 IRF7 POU2F1 POU2F2 POU4F1 POU4F2 YY1
5274105
chr18 54327701 rs556700792 C G
FOXI1
5274106
chr18 54327703 rs112256240 A G
FOXI1
5274107
chr18 54327706 rs533107264 AT A
FOXI1 GATA2 MZF1 SRF
5274108
chr18 54327778 rs78144533 A G no 5274109
Genes possibly regulated by vista27543[chr18:54327448-54327828]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 54264439 54318831 - TXNL1 ENSG00000091164.8 54318831 0.75 0.99 16603 91383
chr18 54318574 54698828 + WDR7 ENSG00000091157.9 54318574 0.83 0.99 16604 91126
Expression level of Genes
Back to top
miRNAs possibly regulated by vista27543[chr18:54327448-54327828]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results