EnhancerDB
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  3. vista27549[chr18:54745075-54745213]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27549[chr18:54745075-54745213]
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Tissue distribution of vista27549
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Transcription factor that possibly regulate vista27549[chr18:54745075-54745213]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 54744988 54745432 NFIC UCSC Txn Factor no Conserved 108337601
chr18 54744990 54745732 RUNX3 UCSC Txn Factor no Conserved 108337603
chr18 54745024 54745392 FOXM1 UCSC Txn Factor no Conserved 108337606
chr18 54745026 54745367 PAX5 UCSC Txn Factor no Conserved 108337609
chr18 54745033 54745418 MTA3 UCSC Txn Factor no Conserved 108337613
chr18 54745044 54745354 POU2F2 UCSC Txn Factor no Conserved 108337617
chr18 54745046 54745390 EBF1 UCSC Txn Factor no Conserved 108337619
chr18 54745055 54745390 ATF2 UCSC Txn Factor no Conserved 108337623
chr18 54745066 54745173 BHLHE40 UCSC Txn Factor no Conserved 108337626
chr18 54745094 54745334 SPI1 UCSC Txn Factor no Conserved 108337637
chr18 54745111 54745337 BCL11A UCSC Txn Factor no Conserved 108337640
chr18 54745133 54745363 EGR1 UCSC Txn Factor no Conserved 108337648
chr18 54745080 54745084 NFE TRANSFAC yes 42712811
chr18 54745080 54745084 NFE TRANSFAC yes 110860218
chr18 54745094 54745111 RARA JASPAR yes 42712812
chr18 54745094 54745111 RARA JASPAR yes 110860219
chr18 54745100 54745103 MYB TRANSFAC yes 42712813
chr18 54745100 54745103 MYB TRANSFAC yes 110860220
chr18 54745121 54745141 ESR1 JASPAR yes 42712814
chr18 54745121 54745141 ESR1 JASPAR yes 110860221
chr18 54745124 54745142 ESR1 JASPAR yes 42712815
chr18 54745124 54745142 ESR1 JASPAR yes 110860222
chr18 54745124 54745144 PPARG JASPAR yes 42712816
chr18 54745124 54745144 PPARG JASPAR yes 110860223
chr18 54745126 54745141 ESR2 JASPAR yes 42712817
chr18 54745126 54745141 ESR2 JASPAR yes 110860224
chr18 54745162 54745167 SP1 TRANSFAC yes 42712818
chr18 54745162 54745167 SP1 TRANSFAC yes 110860225
chr18 54745162 54745168 SP1 TRANSFAC yes 42712819
chr18 54745162 54745168 SP1 TRANSFAC yes 110860226
chr18 54745175 54745193 SRF JASPAR yes 42712820
chr18 54745175 54745193 SRF JASPAR yes 110860227
chr18 54745181 54745195 SPI1 JASPAR yes 42712821
chr18 54745181 54745195 SPIC JASPAR yes 42712822
chr18 54745181 54745195 SPI1 JASPAR yes 110860228
chr18 54745181 54745195 SPIC JASPAR yes 110860229
chr18 54745182 54745195 ELF1 JASPAR yes 42712823
chr18 54745182 54745195 ELF1 JASPAR yes 110860230
chr18 54745184 54745195 ELF5 JASPAR yes 42712824
chr18 54745184 54745195 ELF5 JASPAR yes 110860231
chr18 54745186 54745191 ETS2 TRANSFAC yes 42712825
chr18 54745186 54745191 ETS2 TRANSFAC yes 110860232
chr18 54745186 54745194 FEV JASPAR yes 42712826
chr18 54745186 54745194 FEV JASPAR yes 110860233
chr18 54745187 54745194 SPI1 JASPAR yes 42712827
chr18 54745187 54745194 SPI1 JASPAR yes 110860234
chr18 54745187 54745197 NFKB1 JASPAR yes 42712828
chr18 54745187 54745197 NFKB1 JASPAR yes 110860235
chr18 54745188 54745198 NFKB1 JASPAR yes 42712829
chr18 54745188 54745198 REL JASPAR yes 42712830
chr18 54745188 54745198 NFKB1 JASPAR yes 110860236
chr18 54745188 54745198 REL JASPAR yes 110860237
chr18 54745188 54745209 REST JASPAR yes 42712831
chr18 54745188 54745209 REST JASPAR yes 110860238
chr18 54745191 54745205 EBF1 JASPAR yes 42712832
chr18 54745191 54745205 EBF1 JASPAR yes 110860239
chr18 54745192 54745203 EBF1 JASPAR yes 42712833
chr18 54745192 54745203 EBF1 JASPAR yes 110860240
chr18 54745193 54745199 MZF1 JASPAR yes 42712834
chr18 54745193 54745199 MZF1 JASPAR yes 110860241
chr18 54745197 54745213 ZNF143 JASPAR yes 42712835
chr18 54745197 54745213 ZNF143 JASPAR yes 110860242
chr18 54745199 54745215 RFX4 JASPAR yes 42712836
chr18 54745199 54745215 RFX5 JASPAR yes 42712837
chr18 54745199 54745215 RFX4 JASPAR yes 110860243
chr18 54745199 54745215 RFX5 JASPAR yes 110860244
chr18 54745202 54745213 RUNX1 JASPAR yes 42712838
chr18 54745202 54745213 RUNX1 JASPAR yes 110860245
chr18 54745210 54745213 MYB TRANSFAC yes 42712839
chr18 54745210 54745213 MYB TRANSFAC yes 110860246
SNP sites on vista27549[chr18:54745075-54745213]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 54745101 rs114896507 T A
ATF2 BHLHE40 EBF1 FOXM1 MTA3 MYB NFIC PAX5 POU2F2 RARA RUNX3 SPI1
5275025
chr18 54745132 rs12458351 A T
ATF2 BCL11A BHLHE40 EBF1 ESR1 ESR2 FOXM1 MTA3 NFIC PAX5 POU2F2 PPARG RUNX3 SPI1
5275026
Genes possibly regulated by vista27549[chr18:54745075-54745213]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 54814293 54817531 + BOD1L2 ENSG00000228075.4 54814293 0.68 0.98 16605 30920
Expression level of Genes
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miRNAs possibly regulated by vista27549[chr18:54745075-54745213]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results