EnhancerDB
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  3. vista27551[chr18:55098490-55098766]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27551[chr18:55098490-55098766]
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Tissue distribution of vista27551
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Transcription factor that possibly regulate vista27551[chr18:55098490-55098766]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55098490 55098495 MYC TRANSFAC yes 42712950
chr18 55098490 55098495 USF1 TRANSFAC yes 42712951
chr18 55098490 55098495 USF2 TRANSFAC yes 42712952
chr18 55098494 55098510 RFX4 JASPAR yes 42712953
chr18 55098514 55098518 NFE TRANSFAC yes 42712954
chr18 55098521 55098525 YY1 TRANSFAC yes 42712955
chr18 55098522 55098536 EBF1 JASPAR yes 42712956
chr18 55098528 55098549 ZNF263 JASPAR yes 42712957
chr18 55098558 55098562 NFE TRANSFAC yes 42712958
chr18 55098568 55098573 ETS2 TRANSFAC yes 42712959
chr18 55098583 55098598 SOX21 JASPAR yes 42712960
chr18 55098589 55098601 MEF2D JASPAR yes 42712961
chr18 55098591 55098603 FOXI1 JASPAR yes 42712962
chr18 55098594 55098598 YY1 TRANSFAC yes 42712963
chr18 55098615 55098629 STAT1 JASPAR yes 42712964
chr18 55098619 55098624 ETS2 TRANSFAC yes 42712965
chr18 55098621 55098639 RARA JASPAR yes 42712966
chr18 55098649 55098654 MYB TRANSFAC yes 42712967
chr18 55098659 55098663 YY1 TRANSFAC yes 42712968
chr18 55098663 55098674 CEBPB JASPAR yes 42712969
chr18 55098689 55098704 HSF1 JASPAR yes 42712970
chr18 55098691 55098706 STAT1 JASPAR yes 42712971
chr18 55098693 55098704 STAT1 JASPAR yes 42712972
chr18 55098693 55098704 STAT3 JASPAR yes 42712973
chr18 55098694 55098705 STAT1 JASPAR yes 42712974
chr18 55098694 55098705 STAT3 JASPAR yes 42712975
chr18 55098698 55098705 NFATC2 JASPAR yes 42712976
chr18 55098706 55098710 YY1 TRANSFAC yes 42712977
chr18 55098714 55098720 TCF1 TRANSFAC yes 42712978
chr18 55098733 55098754 IRF1 JASPAR yes 42712979
chr18 55098736 55098750 SPI1 JASPAR yes 42712980
chr18 55098736 55098750 SPIC JASPAR yes 42712981
chr18 55098737 55098745 EHF JASPAR yes 42712982
chr18 55098737 55098758 IRF1 JASPAR yes 42712983
chr18 55098738 55098759 IRF1 JASPAR yes 42712984
chr18 55098739 55098744 ETS2 TRANSFAC yes 42712985
chr18 55098739 55098760 IRF1 JASPAR yes 42712986
chr18 55098740 55098761 IRF1 JASPAR yes 42712987
chr18 55098741 55098756 FOXP1 JASPAR yes 42712988
chr18 55098741 55098762 IRF1 JASPAR yes 42712989
chr18 55098742 55098757 FOXP1 JASPAR yes 42712990
chr18 55098742 55098763 IRF1 JASPAR yes 42712991
chr18 55098743 55098758 FOXP1 JASPAR yes 42712992
chr18 55098743 55098764 IRF1 JASPAR yes 42712993
chr18 55098744 55098759 FOXP1 JASPAR yes 42712994
chr18 55098745 55098760 FOXP1 JASPAR yes 42712995
chr18 55098746 55098761 FOXP1 JASPAR yes 42712996
chr18 55098747 55098762 FOXP1 JASPAR yes 42712997
chr18 55098748 55098763 FOXP1 JASPAR yes 42712998
chr18 55098749 55098764 FOXP1 JASPAR yes 42712999
chr18 55098750 55098765 FOXP1 JASPAR yes 42713000
chr18 55098751 55098766 FOXP1 JASPAR yes 42713001
SNP sites on vista27551[chr18:55098490-55098766]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55098546 rs576148302 G T
ZNF263
5276250
chr18 55098558 rs75285879 T G
NFE
5276251
chr18 55098657 rs187557248 C A no 5276252
chr18 55098698 rs146967254 C G
HSF1 NFATC2 STAT1 STAT3
5276253
chr18 55098713 rs77772132 C T no 5276254
chr18 55098743 rs33993911 C CT
EHF ETS2 FOXP1 IRF1 SPI1 SPIC
5276255
chr18 55098743 rs36056682 C CT
EHF ETS2 FOXP1 IRF1 SPI1 SPIC
5276256
Genes possibly regulated by vista27551[chr18:55098490-55098766]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55018044 55038962 + ST8SIA3 ENSG00000177511.5 55018044 0.99 1.0 16606 19554
chr18 55102917 55158529 + ONECUT2 ENSG00000119547.5 55102917 0.98 0.99 16607 95849
Expression level of Genes
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miRNAs possibly regulated by vista27551[chr18:55098490-55098766]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results