EnhancerDB
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  3. vista27554[chr18:55104670-55104954]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27554[chr18:55104670-55104954]
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Tissue distribution of vista27554
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Transcription factor that possibly regulate vista27554[chr18:55104670-55104954]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337729
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337730
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337731
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337732
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337733
chr18 55104951 55105469 ZNF263 UCSC Txn Factor no Conserved 108337741
chr18 55104951 55105469 ZNF263 UCSC Txn Factor no Conserved 108337742
chr18 55104697 55104708 E2F6 JASPAR yes 42713081
chr18 55104718 55104734 SRF JASPAR yes 42713082
chr18 55104724 55104728 YY1 TRANSFAC yes 42713083
chr18 55104727 55104743 NFYA JASPAR yes 42713084
chr18 55104729 55104733 ESR1 TRANSFAC yes 42713085
chr18 55104730 55104745 NFYB JASPAR yes 42713086
chr18 55104735 55104747 TFAP2A JASPAR yes 42713087
chr18 55104735 55104747 TFAP2B JASPAR yes 42713088
chr18 55104735 55104747 TFAP2C JASPAR yes 42713089
chr18 55104753 55104766 TFAP2A JASPAR yes 42713090
chr18 55104753 55104766 TFAP2C JASPAR yes 42713091
chr18 55104754 55104767 TFAP2A JASPAR yes 42713092
chr18 55104754 55104767 TFAP2B JASPAR yes 42713093
chr18 55104754 55104767 TFAP2C JASPAR yes 42713094
chr18 55104778 55104783 GATA2 JASPAR yes 42713095
chr18 55104798 55104814 SRF JASPAR yes 42713096
chr18 55104803 55104824 REST JASPAR yes 42713097
chr18 55104804 55104823 REST JASPAR yes 42713098
chr18 55104827 55104837 NFKB1 JASPAR yes 42713099
chr18 55104865 55104869 H1TF2 TRANSFAC yes 42713100
chr18 55104865 55104869 NFE TRANSFAC yes 42713101
chr18 55104865 55104869 SRF TRANSFAC yes 42713102
chr18 55104865 55104876 ESRRA JASPAR yes 42713103
chr18 55104881 55104897 SOX4 JASPAR yes 42713104
chr18 55104884 55104899 NR2C2 JASPAR yes 42713105
chr18 55104886 55104896 SP1 JASPAR yes 42713106
chr18 55104887 55104891 LFA1 TRANSFAC yes 42713107
chr18 55104899 55104917 RARA JASPAR yes 42713108
chr18 55104905 55104916 ESRRA JASPAR yes 42713109
chr18 55104905 55104916 ESRRB JASPAR yes 42713110
chr18 55104906 55104926 PPARG JASPAR yes 42713111
chr18 55104907 55104915 NR4A2 JASPAR yes 42713112
chr18 55104907 55104924 ESR1 JASPAR yes 42713113
chr18 55104907 55104925 ESR1 JASPAR yes 42713114
chr18 55104908 55104923 ESR2 JASPAR yes 42713115
chr18 55104909 55104913 ESR1 TRANSFAC yes 42713116
chr18 55104928 55104949 ZNF263 JASPAR yes 42713117
SNP sites on vista27554[chr18:55104670-55104954]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55104772 rs79087017 G A
EZH2
5276314
chr18 55104842 rs563195684 G A
EZH2
5276315
chr18 55104850 rs7232930 G A,C
EZH2
5276316
chr18 55104894 rs3786486 G C
EZH2 NR2C2 SOX4 SP1
5276317
Genes possibly regulated by vista27554[chr18:55104670-55104954]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55018044 55038962 + ST8SIA3 ENSG00000177511.5 55018044 0.99 1.0 16606 13374
chr18 55102917 55158529 + ONECUT2 ENSG00000119547.5 55102917 0.98 0.99 16607 98247
Expression level of Genes
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miRNAs possibly regulated by vista27554[chr18:55104670-55104954]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results