EnhancerDB
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  3. vista27556[chr18:55108186-55108329]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27556[chr18:55108186-55108329]
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Tissue distribution of vista27556
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Transcription factor that possibly regulate vista27556[chr18:55108186-55108329]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337729
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337730
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337731
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337732
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337733
chr18 55108255 55108267 GLI2 JASPAR yes 42713120
chr18 55108258 55108263 SP1 TRANSFAC yes 42713121
chr18 55108260 55108271 E2F1 JASPAR yes 42713122
chr18 55108261 55108266 SP1 TRANSFAC yes 42713123
chr18 55108261 55108272 E2F4 JASPAR yes 42713124
chr18 55108261 55108272 E2F6 JASPAR yes 42713125
chr18 55108262 55108267 SP1 TRANSFAC yes 42713126
chr18 55108271 55108275 LFA1 TRANSFAC yes 42713127
chr18 55108278 55108299 ZNF263 JASPAR yes 42713128
chr18 55108280 55108285 SP1 TRANSFAC yes 42713129
chr18 55108281 55108286 SP1 TRANSFAC yes 42713130
SNP sites on vista27556[chr18:55108186-55108329]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55108207 rs144803789 G C
EZH2
5276366
chr18 55108224 rs528043772 G A
EZH2
5276367
chr18 55108277 rs148559441 G C
EZH2
5276368
Genes possibly regulated by vista27556[chr18:55108186-55108329]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55018044 55038962 + ST8SIA3 ENSG00000177511.5 55018044 0.99 1.0 16606 9858
chr18 55102917 55158529 + ONECUT2 ENSG00000119547.5 55102917 0.98 0.99 16607 94731
Expression level of Genes
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miRNAs possibly regulated by vista27556[chr18:55108186-55108329]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results