EnhancerDB
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  3. vista27558[chr18:55109141-55109496]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27558[chr18:55109141-55109496]
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Tissue distribution of vista27558
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Transcription factor that possibly regulate vista27558[chr18:55109141-55109496]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337729
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337730
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337731
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337732
chr18 55103098 55109197 EZH2 UCSC Txn Factor no Conserved 108337733
chr18 55109156 55109169 ELF1 JASPAR yes 42713163
chr18 55109158 55109169 ETV2 JASPAR yes 42713164
chr18 55109159 55109169 ELK1 JASPAR yes 42713165
chr18 55109159 55109169 ELK3 JASPAR yes 42713166
chr18 55109159 55109169 ERF JASPAR yes 42713167
chr18 55109159 55109169 ERG JASPAR yes 42713168
chr18 55109159 55109169 ETS1 JASPAR yes 42713169
chr18 55109159 55109169 ETV1 JASPAR yes 42713170
chr18 55109159 55109169 ETV3 JASPAR yes 42713171
chr18 55109159 55109169 ETV4 JASPAR yes 42713172
chr18 55109159 55109169 ETV6 JASPAR yes 42713173
chr18 55109159 55109169 FEV JASPAR yes 42713174
chr18 55109159 55109169 FLI1 JASPAR yes 42713175
chr18 55109159 55109170 ELK4 JASPAR yes 42713176
chr18 55109159 55109170 FLI1 JASPAR yes 42713177
chr18 55109160 55109168 EHF JASPAR yes 42713178
chr18 55109160 55109168 FEV JASPAR yes 42713179
chr18 55109161 55109168 SPI1 JASPAR yes 42713180
chr18 55109181 55109186 TFAP2A TRANSFAC yes 42713181
chr18 55109181 55109187 MZF1 JASPAR yes 42713182
chr18 55109181 55109194 NFKB1 JASPAR yes 42713183
chr18 55109182 55109193 NFKB1 JASPAR yes 42713184
chr18 55109188 55109198 SP1 JASPAR yes 42713185
chr18 55109191 55109197 NFE2 TRANSFAC yes 42713186
chr18 55109193 55109202 SP1 TRANSFAC yes 42713187
chr18 55109193 55109214 ZNF263 JASPAR yes 42713188
chr18 55109194 55109214 RREB1 JASPAR yes 42713189
chr18 55109200 55109210 SP1 JASPAR yes 42713190
chr18 55109201 55109212 E2F6 JASPAR yes 42713191
chr18 55109207 55109219 INSM1 JASPAR yes 42713192
chr18 55109229 55109247 ESR1 JASPAR yes 42713193
chr18 55109237 55109241 ESR1 TRANSFAC yes 42713194
chr18 55109274 55109287 ZBTB18 JASPAR yes 42713195
chr18 55109275 55109285 FIGLA JASPAR yes 42713196
chr18 55109275 55109285 ID4 JASPAR yes 42713197
chr18 55109275 55109285 TCF3 JASPAR yes 42713198
chr18 55109275 55109285 TCF4 JASPAR yes 42713199
chr18 55109276 55109285 SNAI2 JASPAR yes 42713200
chr18 55109277 55109282 USF2 TRANSFAC yes 42713201
chr18 55109283 55109298 STAT1 JASPAR yes 42713202
chr18 55109286 55109307 IRF1 JASPAR yes 42713203
chr18 55109290 55109297 NFATC2 JASPAR yes 42713204
chr18 55109315 55109320 ETS2 TRANSFAC yes 42713205
chr18 55109317 55109328 E2F4 JASPAR yes 42713206
chr18 55109317 55109328 E2F6 JASPAR yes 42713207
chr18 55109318 55109329 E2F1 JASPAR yes 42713208
chr18 55109344 55109364 RREB1 JASPAR yes 42713209
chr18 55109349 55109355 NFIC JASPAR yes 42713210
chr18 55109382 55109392 NFATC3 JASPAR yes 42713211
chr18 55109383 55109390 NFATC2 JASPAR yes 42713212
chr18 55109383 55109394 STAT3 JASPAR yes 42713213
chr18 55109411 55109423 POU3F1 JASPAR yes 42713214
chr18 55109412 55109422 NFATC3 JASPAR yes 42713215
chr18 55109414 55109421 NFATC2 JASPAR yes 42713216
chr18 55109415 55109436 IRF1 JASPAR yes 42713217
chr18 55109417 55109429 FOXC2 JASPAR yes 42713218
chr18 55109420 55109432 IRF1 JASPAR yes 42713219
chr18 55109440 55109449 NKX3-2 JASPAR yes 42713220
chr18 55109470 55109491 IRF1 JASPAR yes 42713221
chr18 55109471 55109492 IRF1 JASPAR yes 42713222
chr18 55109472 55109487 STAT2 JASPAR yes 42713223
chr18 55109473 55109494 IRF1 JASPAR yes 42713224
chr18 55109475 55109490 FOXP1 JASPAR yes 42713225
chr18 55109476 55109491 FOXP1 JASPAR yes 42713226
chr18 55109477 55109492 FOXP1 JASPAR yes 42713227
chr18 55109478 55109493 FOXP1 JASPAR yes 42713228
chr18 55109479 55109494 FOXP1 JASPAR yes 42713229
chr18 55109480 55109495 FOXP1 JASPAR yes 42713230
chr18 55109481 55109496 FOXP1 JASPAR yes 42713231
SNP sites on vista27558[chr18:55109141-55109496]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55109265 rs532115464 G GTGTC no 5276375
chr18 55109324 rs187269717 C G,T
E2F1 E2F4 E2F6
5276376
chr18 55109335 rs547121482 G A no 5276377
chr18 55109346 rs58797469 AC A
RREB1
5276378
chr18 55109346 rs796475628 AC A
RREB1
5276379
chr18 55109378 rs372684829 G A no 5276380
chr18 55109380 rs550754868 T G no 5276381
chr18 55109425 rs11365976 AT A
FOXC2 IRF1
5276382
chr18 55109442 rs4940401 T G
NKX3-2
5276383
chr18 55109459 rs116806211 A G no 5276384
chr18 55109475 rs60895420 G T
FOXP1 IRF1 STAT2
5276385
chr18 55109476 rs3786483 G T
FOXP1 IRF1 STAT2
5276386
Genes possibly regulated by vista27558[chr18:55109141-55109496]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55018044 55038962 + ST8SIA3 ENSG00000177511.5 55018044 0.99 1.0 16606 8903
chr18 55102917 55158529 + ONECUT2 ENSG00000119547.5 55102917 0.98 0.99 16607 93776
Expression level of Genes
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miRNAs possibly regulated by vista27558[chr18:55109141-55109496]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results