EnhancerDB
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  3. vista27565[chr18:55382886-55383034]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27565[chr18:55382886-55383034]
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Tissue distribution of vista27565
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Transcription factor that possibly regulate vista27565[chr18:55382886-55383034]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55382886 55382890 H1TF2 TRANSFAC yes 42713463
chr18 55382886 55382890 NFE TRANSFAC yes 42713464
chr18 55382886 55382890 SRF TRANSFAC yes 42713465
chr18 55382886 55382890 H1TF2 TRANSFAC yes 110877773
chr18 55382886 55382890 NFE TRANSFAC yes 110877774
chr18 55382886 55382890 SRF TRANSFAC yes 110877775
chr18 55382891 55382904 SMAD2 JASPAR yes 42713466
chr18 55382891 55382904 SMAD2 JASPAR yes 110877776
chr18 55382926 55382945 CTCF JASPAR yes 42713467
chr18 55382926 55382945 CTCF JASPAR yes 110877777
chr18 55382950 55382954 YY1 TRANSFAC yes 42713468
chr18 55382950 55382954 YY1 TRANSFAC yes 110877778
chr18 55382964 55382969 ETS2 TRANSFAC yes 42713469
chr18 55382964 55382969 ETS2 TRANSFAC yes 110877779
chr18 55382974 55382988 PAX6 JASPAR yes 42713470
chr18 55382974 55382988 PAX6 JASPAR yes 110877780
chr18 55382990 55382996 HiNF-A TRANSFAC yes 42713471
chr18 55382990 55382996 HiNF-A TRANSFAC yes 110877781
chr18 55383008 55383020 FOXI1 JASPAR yes 42713472
chr18 55383008 55383020 FOXI1 JASPAR yes 110877782
chr18 55383027 55383032 H4TF1 TRANSFAC yes 42713473
chr18 55383027 55383032 H4TF1 TRANSFAC yes 110877783
SNP sites on vista27565[chr18:55382886-55383034]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista27565[chr18:55382886-55383034]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55267888 55289445 - NARS ENSG00000134440.7 55289445 0.69 1.0 16609 6559
chr18 55313658 55470333 - ATP8B1 ENSG00000081923.6 55470333 0.72 1.0 16610 12701
Expression level of Genes
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miRNAs possibly regulated by vista27565[chr18:55382886-55383034]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results