EnhancerDB
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  3. vista27566[chr18:55448232-55448442]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27566[chr18:55448232-55448442]
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Tissue distribution of vista27566
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Transcription factor that possibly regulate vista27566[chr18:55448232-55448442]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55448071 55448527 JUND UCSC Txn Factor no Conserved 108337923
chr18 55448149 55448568 NFYB UCSC Txn Factor no Conserved 108337931
chr18 55448217 55448236 REST JASPAR yes 42713474
chr18 55448217 55448236 REST JASPAR yes 110885095
chr18 55448242 55448248 ESR1 TRANSFAC yes 42713475
chr18 55448242 55448248 ESR1 TRANSFAC yes 110885096
chr18 55448244 55448248 ESR1 TRANSFAC yes 42713476
chr18 55448244 55448248 ESR1 TRANSFAC yes 110885097
chr18 55448245 55448255 SREBF1 JASPAR yes 42713477
chr18 55448245 55448255 SREBF2 JASPAR yes 42713478
chr18 55448245 55448255 SREBF1 JASPAR yes 110885098
chr18 55448245 55448255 SREBF2 JASPAR yes 110885099
chr18 55448294 55448297 MYB TRANSFAC yes 42713479
chr18 55448294 55448297 MYB TRANSFAC yes 110885100
chr18 55448305 55448309 ESR1 TRANSFAC yes 42713480
chr18 55448305 55448309 ESR1 TRANSFAC yes 110885101
chr18 55448308 55448322 JUN JASPAR yes 42713481
chr18 55448308 55448322 JUN JASPAR yes 110885102
chr18 55448310 55448321 BATF JASPAR yes 42713482
chr18 55448310 55448321 BATF JASPAR yes 110885103
chr18 55448311 55448322 FOSL2 JASPAR yes 42713483
chr18 55448311 55448322 JUNB JASPAR yes 42713484
chr18 55448311 55448322 FOSL2 JASPAR yes 110885104
chr18 55448311 55448322 JUNB JASPAR yes 110885105
chr18 55448312 55448323 FOS JASPAR yes 42713485
chr18 55448312 55448323 FOSL1 JASPAR yes 42713486
chr18 55448312 55448323 JUND JASPAR yes 42713487
chr18 55448312 55448323 NFE2 JASPAR yes 42713488
chr18 55448312 55448323 FOS JASPAR yes 110885106
chr18 55448312 55448323 FOSL1 JASPAR yes 110885107
chr18 55448312 55448323 JUND JASPAR yes 110885108
chr18 55448312 55448323 NFE2 JASPAR yes 110885109
chr18 55448313 55448322 JDP2 JASPAR yes 42713489
chr18 55448313 55448322 JDP2 JASPAR yes 110885110
chr18 55448313 55448324 FOSL2 JASPAR yes 42713490
chr18 55448313 55448324 JUNB JASPAR yes 42713491
chr18 55448313 55448324 FOSL2 JASPAR yes 110885111
chr18 55448313 55448324 JUNB JASPAR yes 110885112
chr18 55448313 55448327 JUN JASPAR yes 42713492
chr18 55448313 55448327 JUN JASPAR yes 110885113
chr18 55448314 55448325 BATF JASPAR yes 42713493
chr18 55448314 55448325 BATF JASPAR yes 110885114
chr18 55448328 55448346 SRF JASPAR yes 42713494
chr18 55448328 55448346 SRF JASPAR yes 110885115
chr18 55448330 55448351 IRF1 JASPAR yes 42713495
chr18 55448330 55448351 IRF1 JASPAR yes 110885116
chr18 55448334 55448348 SPI1 JASPAR yes 42713496
chr18 55448334 55448348 SPIC JASPAR yes 42713497
chr18 55448334 55448348 SPI1 JASPAR yes 110885117
chr18 55448334 55448348 SPIC JASPAR yes 110885118
chr18 55448335 55448348 ELF1 JASPAR yes 42713498
chr18 55448335 55448348 ELF1 JASPAR yes 110885119
chr18 55448339 55448344 ETS2 TRANSFAC yes 42713499
chr18 55448339 55448344 ETS2 TRANSFAC yes 110885120
chr18 55448346 55448350 YY1 TRANSFAC yes 42713500
chr18 55448346 55448350 YY1 TRANSFAC yes 110885121
chr18 55448347 55448365 MAFF JASPAR yes 42713501
chr18 55448347 55448365 MAFF JASPAR yes 110885122
chr18 55448349 55448360 NRL JASPAR yes 42713502
chr18 55448349 55448360 NRL JASPAR yes 110885123
chr18 55448349 55448364 MAFK JASPAR yes 42713503
chr18 55448349 55448364 MAFK JASPAR yes 110885124
chr18 55448349 55448367 NFYA JASPAR yes 42713504
chr18 55448349 55448367 NFYA JASPAR yes 110885125
chr18 55448352 55448368 NFYA JASPAR yes 42713505
chr18 55448352 55448368 NFYA JASPAR yes 110885126
chr18 55448355 55448370 NFYB JASPAR yes 42713506
chr18 55448355 55448370 NFYB JASPAR yes 110885127
chr18 55448357 55448362 NFY TRANSFAC yes 42713507
chr18 55448357 55448362 NFY TRANSFAC yes 110885128
chr18 55448381 55448391 NFKB1 JASPAR yes 42713508
chr18 55448381 55448391 NFKB1 JASPAR yes 110885129
chr18 55448381 55448392 NFKB1 JASPAR yes 42713509
chr18 55448381 55448392 NFKB1 JASPAR yes 110885130
chr18 55448381 55448396 HSF1 JASPAR yes 42713510
chr18 55448381 55448396 HSF1 JASPAR yes 110885131
chr18 55448382 55448392 RELA JASPAR yes 42713511
chr18 55448382 55448392 REL JASPAR yes 42713512
chr18 55448382 55448392 RELA JASPAR yes 110885132
chr18 55448382 55448392 REL JASPAR yes 110885133
chr18 55448396 55448401 ETS2 TRANSFAC yes 42713513
chr18 55448396 55448401 ETS2 TRANSFAC yes 110885134
chr18 55448402 55448407 GATA2 JASPAR yes 42713514
chr18 55448402 55448407 GATA2 JASPAR yes 110885135
chr18 55448407 55448413 HiNF-A TRANSFAC yes 42713515
chr18 55448407 55448413 HiNF-A TRANSFAC yes 110885136
chr18 55448428 55448434 TCF1 TRANSFAC yes 42713516
chr18 55448428 55448434 TCF1 TRANSFAC yes 110885137
SNP sites on vista27566[chr18:55448232-55448442]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55448382 rs4941086 G A
HSF1 JUND NFKB1 NFYB REL RELA
5278089
chr18 55448433 rs78756095 A G
JUND NFYB TCF1
5278090
Genes possibly regulated by vista27566[chr18:55448232-55448442]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55313658 55470333 - ATP8B1 ENSG00000081923.6 55470333 0.72 1.0 16610 78109
Expression level of Genes
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miRNAs possibly regulated by vista27566[chr18:55448232-55448442]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results