EnhancerDB
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  3. vista27569[chr18:55513608-55513807]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27569[chr18:55513608-55513807]
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Tissue distribution of vista27569
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Transcription factor that possibly regulate vista27569[chr18:55513608-55513807]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55513464 55513914 GATA1 UCSC Txn Factor no Conserved 108337985
chr18 55513562 55513791 JUND UCSC Txn Factor no Conserved 108338009
chr18 55513596 55513612 SOX8 JASPAR yes 42713564
chr18 55513596 55513612 SOX8 JASPAR yes 110892528
chr18 55513606 55513617 DMRT3 JASPAR yes 42713565
chr18 55513606 55513617 DMRT3 JASPAR yes 110892529
chr18 55513650 55513661 FOSL1 JASPAR yes 42713566
chr18 55513650 55513661 JUND JASPAR yes 42713567
chr18 55513650 55513661 FOSL1 JASPAR yes 110892530
chr18 55513650 55513661 JUND JASPAR yes 110892531
chr18 55513651 55513662 FOSL2 JASPAR yes 42713568
chr18 55513651 55513662 JUNB JASPAR yes 42713569
chr18 55513651 55513662 FOSL2 JASPAR yes 110892532
chr18 55513651 55513662 JUNB JASPAR yes 110892533
chr18 55513651 55513665 JUN JASPAR yes 42713570
chr18 55513651 55513665 JUN JASPAR yes 110892534
chr18 55513668 55513672 YY1 TRANSFAC yes 42713571
chr18 55513668 55513672 YY1 TRANSFAC yes 110892535
chr18 55513671 55513677 NFIC JASPAR yes 42713572
chr18 55513671 55513677 NFIC JASPAR yes 110892536
chr18 55513689 55513692 MYB TRANSFAC yes 42713573
chr18 55513689 55513692 MYB TRANSFAC yes 110892537
chr18 55513691 55513705 GATA2 JASPAR yes 42713574
chr18 55513691 55513705 GATA2 JASPAR yes 110892538
chr18 55513693 55513701 GATA3 JASPAR yes 42713575
chr18 55513693 55513701 GATA5 JASPAR yes 42713576
chr18 55513693 55513701 GATA3 JASPAR yes 110892539
chr18 55513693 55513701 GATA5 JASPAR yes 110892540
chr18 55513728 55513742 TLX1 JASPAR yes 42713577
chr18 55513728 55513742 TLX1 JASPAR yes 110892541
chr18 55513730 55513742 INSM1 JASPAR yes 42713578
chr18 55513730 55513742 TFAP2A JASPAR yes 42713579
chr18 55513730 55513742 TFAP2B JASPAR yes 42713580
chr18 55513730 55513742 TFAP2C JASPAR yes 42713581
chr18 55513730 55513742 INSM1 JASPAR yes 110892542
chr18 55513730 55513742 TFAP2A JASPAR yes 110892543
chr18 55513730 55513742 TFAP2B JASPAR yes 110892544
chr18 55513730 55513742 TFAP2C JASPAR yes 110892545
chr18 55513745 55513766 ZNF263 JASPAR yes 42713582
chr18 55513745 55513766 ZNF263 JASPAR yes 110892546
chr18 55513749 55513770 ZNF263 JASPAR yes 42713583
chr18 55513749 55513770 ZNF263 JASPAR yes 110892547
chr18 55513752 55513773 ZNF263 JASPAR yes 42713584
chr18 55513752 55513773 ZNF263 JASPAR yes 110892548
chr18 55513770 55513773 MYB TRANSFAC yes 42713585
chr18 55513770 55513773 MYB TRANSFAC yes 110892549
chr18 55513773 55513784 EBF1 JASPAR yes 42713586
chr18 55513773 55513784 EBF1 JASPAR yes 110892550
chr18 55513776 55513787 ESRRA JASPAR yes 42713587
chr18 55513776 55513787 ESRRA JASPAR yes 110892551
chr18 55513780 55513784 LFA1 TRANSFAC yes 42713588
chr18 55513780 55513784 LFA1 TRANSFAC yes 110892552
SNP sites on vista27569[chr18:55513608-55513807]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55513797 rs148307278 T C
GATA1
5278933
chr18 55513804 rs547082910 C T
GATA1
5278934
Genes possibly regulated by vista27569[chr18:55513608-55513807]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55313658 55470333 - ATP8B1 ENSG00000081923.6 55470333 0.72 1.0 16610 56725
Expression level of Genes
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miRNAs possibly regulated by vista27569[chr18:55513608-55513807]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results