EnhancerDB
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  3. vista27571[chr18:55671810-55671869]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27571[chr18:55671810-55671869]
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Tissue distribution of vista27571
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Transcription factor that possibly regulate vista27571[chr18:55671810-55671869]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55671804 55671816 POU2F1 JASPAR yes 42713628
chr18 55671804 55671816 POU2F1 JASPAR yes 110907163
chr18 55671804 55671817 POU3F3 JASPAR yes 42713629
chr18 55671804 55671817 POU3F3 JASPAR yes 110907164
chr18 55671804 55671818 POU1F1 JASPAR yes 42713630
chr18 55671804 55671818 POU1F1 JASPAR yes 110907165
chr18 55671805 55671817 POU3F1 JASPAR yes 42713631
chr18 55671805 55671817 POU3F2 JASPAR yes 42713632
chr18 55671805 55671817 POU3F1 JASPAR yes 110907166
chr18 55671805 55671817 POU3F2 JASPAR yes 110907167
chr18 55671809 55671821 HNF1B JASPAR yes 42713633
chr18 55671809 55671821 HNF1B JASPAR yes 110907168
chr18 55671810 55671820 MEF2A JASPAR yes 42713634
chr18 55671810 55671820 MEF2A JASPAR yes 110907169
chr18 55671815 55671819 TEAD2 TRANSFAC yes 42713635
chr18 55671815 55671819 TEAD2 TRANSFAC yes 110907170
chr18 55671825 55671836 JUNB JASPAR yes 42713636
chr18 55671825 55671836 JUNB JASPAR yes 110907171
chr18 55671825 55671839 JUN JASPAR yes 42713637
chr18 55671825 55671839 JUN JASPAR yes 110907172
chr18 55671837 55671841 YY1 TRANSFAC yes 42713638
chr18 55671837 55671841 YY1 TRANSFAC yes 110907173
chr18 55671837 55671848 FOSL1 JASPAR yes 42713639
chr18 55671837 55671848 JUND JASPAR yes 42713640
chr18 55671837 55671848 FOSL1 JASPAR yes 110907174
chr18 55671837 55671848 JUND JASPAR yes 110907175
chr18 55671838 55671849 FOSL2 JASPAR yes 42713641
chr18 55671838 55671849 JUNB JASPAR yes 42713642
chr18 55671838 55671849 FOSL2 JASPAR yes 110907176
chr18 55671838 55671849 JUNB JASPAR yes 110907177
chr18 55671838 55671852 JUN JASPAR yes 42713643
chr18 55671838 55671852 JUN JASPAR yes 110907178
chr18 55671851 55671857 TCF4 TRANSFAC yes 42713644
chr18 55671851 55671857 TCF4 TRANSFAC yes 110907179
chr18 55671851 55671863 FOXI1 JASPAR yes 42713645
chr18 55671851 55671863 FOXI1 JASPAR yes 110907180
chr18 55671851 55671866 FOXP1 JASPAR yes 42713646
chr18 55671851 55671866 FOXP1 JASPAR yes 110907181
chr18 55671852 55671864 FOXC2 JASPAR yes 42713647
chr18 55671852 55671864 FOXC2 JASPAR yes 110907182
chr18 55671854 55671865 FOXA1 JASPAR yes 42713648
chr18 55671854 55671865 FOXA1 JASPAR yes 110907183
chr18 55671855 55671870 FOXP1 JASPAR yes 42713649
chr18 55671855 55671870 FOXP1 JASPAR yes 110907184
chr18 55671856 55671867 FOXP2 JASPAR yes 42713650
chr18 55671856 55671867 FOXP2 JASPAR yes 110907185
chr18 55671859 55671872 POU2F2 JASPAR yes 42713651
chr18 55671859 55671872 POU2F2 JASPAR yes 110907186
chr18 55671867 55671871 YY1 TRANSFAC yes 42713652
chr18 55671867 55671871 YY1 TRANSFAC yes 110907187
SNP sites on vista27571[chr18:55671810-55671869]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55671842 rs184061627 A G,T
FOSL1 FOSL2 JUN JUNB JUND
5280496
chr18 55671860 rs377293642 GT G
FOXA1 FOXC2 FOXI1 FOXP1 FOXP2 POU2F2
5280497
Genes possibly regulated by vista27571[chr18:55671810-55671869]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55711599 56068772 + NEDD4L ENSG00000049759.12 55711599 0.89 0.99 16611 60270
Expression level of Genes
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miRNAs possibly regulated by vista27571[chr18:55671810-55671869]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results