EnhancerDB
  1. Home
  2. Enhancers
  3. vista27572[chr18:55687218-55687390]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27572[chr18:55687218-55687390]
Back to top
Tissue distribution of vista27572
Back to top
Transcription factor that possibly regulate vista27572[chr18:55687218-55687390]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55687213 55687218 H4TF1 TRANSFAC yes 42713653
chr18 55687213 55687218 H4TF1 TRANSFAC yes 110909142
chr18 55687217 55687234 PAX9 JASPAR yes 42713654
chr18 55687217 55687234 PAX9 JASPAR yes 110909143
chr18 55687231 55687242 FOSL1 JASPAR yes 42713655
chr18 55687231 55687242 FOSL1 JASPAR yes 110909144
chr18 55687231 55687249 MAFF JASPAR yes 42713656
chr18 55687231 55687249 MAFF JASPAR yes 110909145
chr18 55687232 55687243 FOSL2 JASPAR yes 42713657
chr18 55687232 55687243 JUNB JASPAR yes 42713658
chr18 55687232 55687243 FOSL2 JASPAR yes 110909146
chr18 55687232 55687243 JUNB JASPAR yes 110909147
chr18 55687232 55687246 JUN JASPAR yes 42713659
chr18 55687232 55687246 JUN JASPAR yes 110909148
chr18 55687232 55687247 MAFK JASPAR yes 42713660
chr18 55687232 55687247 MAFK JASPAR yes 110909149
chr18 55687233 55687244 BATF JASPAR yes 42713661
chr18 55687233 55687244 BATF JASPAR yes 110909150
chr18 55687244 55687248 YY1 TRANSFAC yes 42713662
chr18 55687244 55687248 YY1 TRANSFAC yes 110909151
chr18 55687257 55687263 YY1 JASPAR yes 42713663
chr18 55687257 55687263 YY1 JASPAR yes 110909152
chr18 55687271 55687287 ZNF143 JASPAR yes 42713664
chr18 55687271 55687287 ZNF143 JASPAR yes 110909153
chr18 55687345 55687356 FOXH1 JASPAR yes 42713665
chr18 55687345 55687356 FOXH1 JASPAR yes 110909154
chr18 55687346 55687352 ZNF354C JASPAR yes 42713666
chr18 55687346 55687352 ZNF354C JASPAR yes 110909155
chr18 55687349 55687354 H4TF1 TRANSFAC yes 42713667
chr18 55687349 55687354 H4TF1 TRANSFAC yes 110909156
chr18 55687381 55687402 IRF1 JASPAR yes 42713668
chr18 55687381 55687402 IRF1 JASPAR yes 110909157
chr18 55687385 55687406 IRF1 JASPAR yes 42713669
chr18 55687385 55687406 IRF1 JASPAR yes 110909158
chr18 55687386 55687401 FOXP1 JASPAR yes 42713670
chr18 55687386 55687401 FOXP1 JASPAR yes 110909159
chr18 55687389 55687403 SPIC JASPAR yes 42713671
chr18 55687389 55687403 STAT1 JASPAR yes 42713672
chr18 55687389 55687403 SPIC JASPAR yes 110909160
chr18 55687389 55687403 STAT1 JASPAR yes 110909161
chr18 55687389 55687404 PRDM1 JASPAR yes 42713673
chr18 55687389 55687404 STAT2 JASPAR yes 42713674
chr18 55687389 55687404 PRDM1 JASPAR yes 110909162
chr18 55687389 55687404 STAT2 JASPAR yes 110909163
SNP sites on vista27572[chr18:55687218-55687390]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55687315 rs560986748 A G no 5280661
Genes possibly regulated by vista27572[chr18:55687218-55687390]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55711599 56068772 + NEDD4L ENSG00000049759.12 55711599 0.89 0.99 16611 75791
Expression level of Genes
Back to top
miRNAs possibly regulated by vista27572[chr18:55687218-55687390]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results