EnhancerDB
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  3. vista27574[chr18:55756032-55756268]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27574[chr18:55756032-55756268]
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Tissue distribution of vista27574
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Transcription factor that possibly regulate vista27574[chr18:55756032-55756268]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55756098 55756272 GATA3 UCSC Txn Factor no Conserved 108338085
chr18 55756024 55756033 NKX2-8 JASPAR yes 42713724
chr18 55756024 55756033 NKX2-8 JASPAR yes 110914057
chr18 55756024 55756034 NKX2-3 JASPAR yes 42713725
chr18 55756024 55756034 NKX2-3 JASPAR yes 110914058
chr18 55756053 55756065 FOXI1 JASPAR yes 42713726
chr18 55756053 55756065 FOXI1 JASPAR yes 110914059
chr18 55756055 55756066 FOXB1 JASPAR yes 42713727
chr18 55756055 55756066 FOXC1 JASPAR yes 42713728
chr18 55756055 55756066 FOXB1 JASPAR yes 110914060
chr18 55756055 55756066 FOXC1 JASPAR yes 110914061
chr18 55756056 55756060 YY1 TRANSFAC yes 42713729
chr18 55756056 55756060 YY1 TRANSFAC yes 110914062
chr18 55756072 55756076 YY1 TRANSFAC yes 42713730
chr18 55756072 55756076 YY1 TRANSFAC yes 110914063
chr18 55756079 55756083 YY1 TRANSFAC yes 42713731
chr18 55756079 55756083 YY1 TRANSFAC yes 110914064
chr18 55756119 55756132 ZBTB18 JASPAR yes 42713732
chr18 55756119 55756132 ZBTB18 JASPAR yes 110914065
chr18 55756121 55756131 FIGLA JASPAR yes 42713733
chr18 55756121 55756131 ID4 JASPAR yes 42713734
chr18 55756121 55756131 TCF3 JASPAR yes 42713735
chr18 55756121 55756131 TCF4 JASPAR yes 42713736
chr18 55756121 55756131 FIGLA JASPAR yes 110914066
chr18 55756121 55756131 ID4 JASPAR yes 110914067
chr18 55756121 55756131 TCF3 JASPAR yes 110914068
chr18 55756121 55756131 TCF4 JASPAR yes 110914069
chr18 55756139 55756151 FOXI1 JASPAR yes 42713737
chr18 55756139 55756151 FOXI1 JASPAR yes 110914070
chr18 55756146 55756150 YY1 TRANSFAC yes 42713738
chr18 55756146 55756150 YY1 TRANSFAC yes 110914071
chr18 55756151 55756156 MYB TRANSFAC yes 42713739
chr18 55756151 55756156 MYB TRANSFAC yes 110914072
chr18 55756154 55756173 CTCF JASPAR yes 42713740
chr18 55756154 55756173 CTCF JASPAR yes 110914073
chr18 55756176 55756186 TEAD1 JASPAR yes 42713741
chr18 55756176 55756186 TEAD4 JASPAR yes 42713742
chr18 55756176 55756186 TEAD1 JASPAR yes 110914074
chr18 55756176 55756186 TEAD4 JASPAR yes 110914075
chr18 55756177 55756185 TEAD3 JASPAR yes 42713743
chr18 55756177 55756185 TEAD3 JASPAR yes 110914076
chr18 55756182 55756192 MAX JASPAR yes 42713744
chr18 55756182 55756192 MAX JASPAR yes 110914077
chr18 55756209 55756215 GATA3 JASPAR yes 42713745
chr18 55756209 55756215 GATA3 JASPAR yes 110914078
chr18 55756213 55756221 GATA3 JASPAR yes 42713746
chr18 55756213 55756221 GATA5 JASPAR yes 42713747
chr18 55756213 55756221 GATA3 JASPAR yes 110914079
chr18 55756213 55756221 GATA5 JASPAR yes 110914080
chr18 55756219 55756223 H4TF2 TRANSFAC yes 42713748
chr18 55756219 55756223 H4TF2 TRANSFAC yes 110914081
chr18 55756221 55756227 MZF1 JASPAR yes 42713749
chr18 55756221 55756227 MZF1 JASPAR yes 110914082
SNP sites on vista27574[chr18:55756032-55756268]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55756033 rs10503020 T C
NKX2-3 NKX2-8
5281196
chr18 55756056 rs114466099 G A
FOXB1 FOXC1 FOXI1 YY1
5281197
chr18 55756153 rs74522179 T C
GATA3 MYB
5281198
Genes possibly regulated by vista27574[chr18:55756032-55756268]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55711599 56068772 + NEDD4L ENSG00000049759.12 55711599 0.89 0.99 16611 55567
Expression level of Genes
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miRNAs possibly regulated by vista27574[chr18:55756032-55756268]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results