EnhancerDB
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  3. vista27575[chr18:55768514-55768737]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27575[chr18:55768514-55768737]
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Tissue distribution of vista27575
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Transcription factor that possibly regulate vista27575[chr18:55768514-55768737]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55768624 55768900 SPI1 UCSC Txn Factor no Conserved 108338106
chr18 55768503 55768523 TP53 JASPAR yes 42713750
chr18 55768503 55768523 TP53 JASPAR yes 110915440
chr18 55768553 55768566 ZBTB18 JASPAR yes 42713751
chr18 55768553 55768566 ZBTB18 JASPAR yes 110915441
chr18 55768554 55768566 NHLH1 JASPAR yes 42713752
chr18 55768554 55768566 NHLH1 JASPAR yes 110915442
chr18 55768555 55768565 NHLH1 JASPAR yes 42713753
chr18 55768555 55768565 NHLH1 JASPAR yes 110915443
chr18 55768621 55768632 CEBPA JASPAR yes 42713754
chr18 55768621 55768632 CEBPA JASPAR yes 110915444
chr18 55768624 55768638 MTF1 JASPAR yes 42713755
chr18 55768624 55768638 MTF1 JASPAR yes 110915445
chr18 55768652 55768658 TCF4 TRANSFAC yes 42713756
chr18 55768652 55768658 TCF4 TRANSFAC yes 110915446
chr18 55768667 55768680 POU2F2 JASPAR yes 42713757
chr18 55768667 55768680 POU2F2 JASPAR yes 110915447
chr18 55768667 55768681 POU1F1 JASPAR yes 42713758
chr18 55768667 55768681 POU1F1 JASPAR yes 110915448
chr18 55768668 55768680 POU3F1 JASPAR yes 42713759
chr18 55768668 55768680 POU3F2 JASPAR yes 42713760
chr18 55768668 55768680 POU3F1 JASPAR yes 110915449
chr18 55768668 55768680 POU3F2 JASPAR yes 110915450
chr18 55768668 55768681 POU3F3 JASPAR yes 42713761
chr18 55768668 55768681 POU3F3 JASPAR yes 110915451
chr18 55768669 55768681 POU2F1 JASPAR yes 42713762
chr18 55768669 55768681 POU2F1 JASPAR yes 110915452
chr18 55768670 55768677 POU2F1 TRANSFAC yes 42713763
chr18 55768670 55768677 POU2F2C TRANSFAC yes 42713764
chr18 55768670 55768677 POU2F2 TRANSFAC yes 42713765
chr18 55768670 55768677 POU2F1 TRANSFAC yes 110915453
chr18 55768670 55768677 POU2F2C TRANSFAC yes 110915454
chr18 55768670 55768677 POU2F2 TRANSFAC yes 110915455
chr18 55768670 55768678 POU2F1 TRANSFAC yes 42713766
chr18 55768670 55768678 POU2F1 TRANSFAC yes 110915456
chr18 55768670 55768679 POU3F4 JASPAR yes 42713767
chr18 55768670 55768679 POU5F1B JASPAR yes 42713768
chr18 55768670 55768679 POU3F4 JASPAR yes 110915457
chr18 55768670 55768679 POU5F1B JASPAR yes 110915458
chr18 55768675 55768679 YY1 TRANSFAC yes 42713769
chr18 55768675 55768679 YY1 TRANSFAC yes 110915459
chr18 55768691 55768702 NFE2L2 JASPAR yes 42713770
chr18 55768691 55768702 NFE2L2 JASPAR yes 110915460
chr18 55768696 55768700 ESR1 TRANSFAC yes 42713771
chr18 55768696 55768700 ESR1 TRANSFAC yes 110915461
chr18 55768699 55768709 NFATC3 JASPAR yes 42713772
chr18 55768699 55768709 NFATC3 JASPAR yes 110915462
chr18 55768702 55768720 NR3C1 JASPAR yes 42713773
chr18 55768702 55768720 NR3C1 JASPAR yes 110915463
chr18 55768716 55768722 LEF1 TRANSFAC yes 42713774
chr18 55768716 55768722 SOX10 JASPAR yes 42713775
chr18 55768716 55768722 LEF1 TRANSFAC yes 110915464
chr18 55768716 55768722 SOX10 JASPAR yes 110915465
chr18 55768726 55768736 HOXA2 JASPAR yes 42713776
chr18 55768726 55768736 MEOX1 JASPAR yes 42713777
chr18 55768726 55768736 HOXA2 JASPAR yes 110915466
chr18 55768726 55768736 MEOX1 JASPAR yes 110915467
chr18 55768727 55768737 POU6F2 JASPAR yes 42713778
chr18 55768727 55768737 POU6F2 JASPAR yes 110915468
SNP sites on vista27575[chr18:55768514-55768737]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55768579 rs191277780 G A no 5281384
chr18 55768588 rs182547464 C T no 5281385
Genes possibly regulated by vista27575[chr18:55768514-55768737]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55711599 56068772 + NEDD4L ENSG00000049759.12 55711599 0.89 0.99 16611 43085
Expression level of Genes
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miRNAs possibly regulated by vista27575[chr18:55768514-55768737]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results