EnhancerDB
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  3. vista27576[chr18:55803829-55804070]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27576[chr18:55803829-55804070]
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Tissue distribution of vista27576
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Transcription factor that possibly regulate vista27576[chr18:55803829-55804070]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55803836 55803848 PBX1 JASPAR yes 42713779
chr18 55803836 55803848 PBX1 JASPAR yes 110919100
chr18 55803840 55803850 GSC2 JASPAR yes 42713780
chr18 55803840 55803850 GSC JASPAR yes 42713781
chr18 55803840 55803850 GSC2 JASPAR yes 110919101
chr18 55803840 55803850 GSC JASPAR yes 110919102
chr18 55803841 55803850 PITX3 JASPAR yes 42713782
chr18 55803841 55803850 PITX3 JASPAR yes 110919103
chr18 55803857 55803864 NKX3-1 JASPAR yes 42713783
chr18 55803857 55803864 NKX3-1 JASPAR yes 110919104
chr18 55803865 55803880 SCRT1 JASPAR yes 42713784
chr18 55803865 55803880 SCRT1 JASPAR yes 110919105
chr18 55803867 55803879 GRHL1 JASPAR yes 42713785
chr18 55803867 55803879 GRHL1 JASPAR yes 110919106
chr18 55803868 55803871 MYB TRANSFAC yes 42713786
chr18 55803868 55803871 MYB TRANSFAC yes 110919107
chr18 55803870 55803885 NR2C2 JASPAR yes 42713787
chr18 55803870 55803885 NR2C2 JASPAR yes 110919108
chr18 55803871 55803885 NR2F1 JASPAR yes 42713788
chr18 55803871 55803885 RXRB JASPAR yes 42713789
chr18 55803871 55803885 RXRG JASPAR yes 42713790
chr18 55803871 55803885 NR2F1 JASPAR yes 110919109
chr18 55803871 55803885 RXRB JASPAR yes 110919110
chr18 55803871 55803885 RXRG JASPAR yes 110919111
chr18 55803875 55803885 RORA JASPAR yes 42713791
chr18 55803875 55803885 RORA JASPAR yes 110919112
chr18 55803876 55803887 ESRRB JASPAR yes 42713792
chr18 55803876 55803887 ESRRB JASPAR yes 110919113
chr18 55803876 55803889 NR2F1 JASPAR yes 42713793
chr18 55803876 55803889 NR2F1 JASPAR yes 110919114
chr18 55803877 55803892 LEF1 JASPAR yes 42713794
chr18 55803877 55803892 LEF1 JASPAR yes 110919115
chr18 55803878 55803886 NR4A2 JASPAR yes 42713795
chr18 55803878 55803886 NR4A2 JASPAR yes 110919116
chr18 55803879 55803896 RARA JASPAR yes 42713796
chr18 55803879 55803896 RXRA JASPAR yes 42713797
chr18 55803879 55803896 RARA JASPAR yes 110919117
chr18 55803879 55803896 RXRA JASPAR yes 110919118
chr18 55803880 55803884 ESR1 TRANSFAC yes 42713798
chr18 55803880 55803884 ESR1 TRANSFAC yes 110919119
chr18 55803897 55803912 HSF1 JASPAR yes 42713799
chr18 55803897 55803912 HSF1 JASPAR yes 110919120
chr18 55803898 55803911 HSF1 JASPAR yes 42713800
chr18 55803898 55803911 HSF2 JASPAR yes 42713801
chr18 55803898 55803911 HSF4 JASPAR yes 42713802
chr18 55803898 55803911 HSF1 JASPAR yes 110919121
chr18 55803898 55803911 HSF2 JASPAR yes 110919122
chr18 55803898 55803911 HSF4 JASPAR yes 110919123
chr18 55803899 55803909 TEAD1 JASPAR yes 42713803
chr18 55803899 55803909 TEAD4 JASPAR yes 42713804
chr18 55803899 55803909 TEAD1 JASPAR yes 110919124
chr18 55803899 55803909 TEAD4 JASPAR yes 110919125
chr18 55803900 55803908 TEAD3 JASPAR yes 42713805
chr18 55803900 55803908 TEAD3 JASPAR yes 110919126
chr18 55803903 55803916 HSF2 JASPAR yes 42713806
chr18 55803903 55803916 HSF2 JASPAR yes 110919127
chr18 55803907 55803922 HSF1 JASPAR yes 42713807
chr18 55803907 55803922 HSF1 JASPAR yes 110919128
chr18 55803982 55803995 HSF2 JASPAR yes 42713808
chr18 55803982 55803995 HSF2 JASPAR yes 110919129
chr18 55803986 55804001 HSF1 JASPAR yes 42713809
chr18 55803986 55804001 HSF1 JASPAR yes 110919130
chr18 55803987 55804000 HSF1 JASPAR yes 42713810
chr18 55803987 55804000 HSF2 JASPAR yes 42713811
chr18 55803987 55804000 HSF4 JASPAR yes 42713812
chr18 55803987 55804000 HSF1 JASPAR yes 110919131
chr18 55803987 55804000 HSF2 JASPAR yes 110919132
chr18 55803987 55804000 HSF4 JASPAR yes 110919133
chr18 55804015 55804021 TCF4 TRANSFAC yes 42713813
chr18 55804015 55804021 TCF4 TRANSFAC yes 110919134
chr18 55804021 55804035 ONECUT2 JASPAR yes 42713814
chr18 55804021 55804035 ONECUT2 JASPAR yes 110919135
chr18 55804027 55804045 SRF JASPAR yes 42713815
chr18 55804027 55804045 SRF JASPAR yes 110919136
chr18 55804029 55804034 ETS2 TRANSFAC yes 42713816
chr18 55804029 55804034 ETS2 TRANSFAC yes 110919137
chr18 55804040 55804055 HSF1 JASPAR yes 42713817
chr18 55804040 55804055 HSF1 JASPAR yes 110919138
chr18 55804041 55804054 HSF1 JASPAR yes 42713818
chr18 55804041 55804054 HSF2 JASPAR yes 42713819
chr18 55804041 55804054 HSF4 JASPAR yes 42713820
chr18 55804041 55804054 HSF1 JASPAR yes 110919139
chr18 55804041 55804054 HSF2 JASPAR yes 110919140
chr18 55804041 55804054 HSF4 JASPAR yes 110919141
chr18 55804062 55804073 FOXH1 JASPAR yes 42713821
chr18 55804062 55804073 FOXH1 JASPAR yes 110919142
chr18 55804065 55804078 SCRT2 JASPAR yes 42713822
chr18 55804065 55804078 SCRT2 JASPAR yes 110919143
chr18 55804065 55804080 SCRT1 JASPAR yes 42713823
chr18 55804065 55804080 SCRT1 JASPAR yes 110919144
chr18 55804069 55804079 NKX2-3 JASPAR yes 42713824
chr18 55804069 55804079 NKX2-3 JASPAR yes 110919145
SNP sites on vista27576[chr18:55803829-55804070]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55803875 rs149068988 GT G
GRHL1 NR2C2 NR2F1 RORA RXRB RXRG SCRT1
5281779
chr18 55803901 rs9949775 A G,T
HSF1 HSF2 HSF4 TEAD1 TEAD3 TEAD4
5281780
chr18 55803942 rs534052059 T C no 5281781
chr18 55804047 rs141839900 A G
HSF1 HSF2 HSF4
5281782
Genes possibly regulated by vista27576[chr18:55803829-55804070]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55711599 56068772 + NEDD4L ENSG00000049759.12 55711599 0.89 0.99 16611 7770
Expression level of Genes
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miRNAs possibly regulated by vista27576[chr18:55803829-55804070]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results