EnhancerDB
  1. Home
  2. Enhancers
  3. vista27579[chr18:55872819-55873190]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27579[chr18:55872819-55873190]
Back to top
Tissue distribution of vista27579
Back to top
Transcription factor that possibly regulate vista27579[chr18:55872819-55873190]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55872814 55872825 E2F6 JASPAR yes 42713979
chr18 55872814 55872825 E2F6 JASPAR yes 110926171
chr18 55872823 55872833 SREBF2 JASPAR yes 42713980
chr18 55872823 55872833 SREBF2 JASPAR yes 110926172
chr18 55872828 55872841 DUXA JASPAR yes 42713981
chr18 55872828 55872841 DUXA JASPAR yes 110926173
chr18 55872829 55872840 DUX4 JASPAR yes 42713982
chr18 55872829 55872840 PHOX2A JASPAR yes 42713983
chr18 55872829 55872840 PROP1 JASPAR yes 42713984
chr18 55872829 55872840 DUX4 JASPAR yes 110926174
chr18 55872829 55872840 PHOX2A JASPAR yes 110926175
chr18 55872829 55872840 PROP1 JASPAR yes 110926176
chr18 55872837 55872852 MEF2C JASPAR yes 42713985
chr18 55872837 55872852 MEF2C JASPAR yes 110926177
chr18 55872858 55872866 EHF JASPAR yes 42713986
chr18 55872858 55872866 EHF JASPAR yes 110926178
chr18 55872863 55872868 SP1 TRANSFAC yes 42713987
chr18 55872863 55872868 SP1 TRANSFAC yes 110926179
chr18 55872884 55872899 HNF1A JASPAR yes 42713988
chr18 55872884 55872899 HNF1A JASPAR yes 110926180
chr18 55872888 55872898 POU6F1 JASPAR yes 42713989
chr18 55872888 55872898 POU6F1 JASPAR yes 110926181
chr18 55872888 55872904 POU4F3 JASPAR yes 42713990
chr18 55872888 55872904 POU4F3 JASPAR yes 110926182
chr18 55872891 55872895 YY1 TRANSFAC yes 42713991
chr18 55872891 55872895 YY1 TRANSFAC yes 110926183
chr18 55872891 55872902 FOSL1 JASPAR yes 42713992
chr18 55872891 55872902 JUND JASPAR yes 42713993
chr18 55872891 55872902 FOSL1 JASPAR yes 110926184
chr18 55872891 55872902 JUND JASPAR yes 110926185
chr18 55872892 55872901 JDP2 JASPAR yes 42713994
chr18 55872892 55872901 JDP2 JASPAR yes 110926186
chr18 55872892 55872903 FOSL2 JASPAR yes 42713995
chr18 55872892 55872903 JUNB JASPAR yes 42713996
chr18 55872892 55872903 FOSL2 JASPAR yes 110926187
chr18 55872892 55872903 JUNB JASPAR yes 110926188
chr18 55872892 55872906 JUN JASPAR yes 42713997
chr18 55872892 55872906 JUN JASPAR yes 110926189
chr18 55872895 55872905 EMX1 JASPAR yes 42713998
chr18 55872895 55872905 HOXB3 JASPAR yes 42713999
chr18 55872895 55872905 EMX1 JASPAR yes 110926190
chr18 55872895 55872905 HOXB3 JASPAR yes 110926191
chr18 55872898 55872902 YY1 TRANSFAC yes 42714000
chr18 55872898 55872902 YY1 TRANSFAC yes 110926192
chr18 55872909 55872914 H4TF1 TRANSFAC yes 42714001
chr18 55872909 55872914 H4TF1 TRANSFAC yes 110926193
chr18 55872919 55872925 HiNF-A TRANSFAC yes 42714002
chr18 55872919 55872925 HiNF-A TRANSFAC yes 110926194
chr18 55872937 55872945 HOXA5 JASPAR yes 42714003
chr18 55872937 55872945 HOXA5 JASPAR yes 110926195
chr18 55872938 55872948 EMX1 JASPAR yes 42714004
chr18 55872938 55872948 EMX2 JASPAR yes 42714005
chr18 55872938 55872948 GBX2 JASPAR yes 42714006
chr18 55872938 55872948 HOXB2 JASPAR yes 42714007
chr18 55872938 55872948 HOXB3 JASPAR yes 42714008
chr18 55872938 55872948 LHX6 JASPAR yes 42714009
chr18 55872938 55872948 MEOX1 JASPAR yes 42714010
chr18 55872938 55872948 MEOX2 JASPAR yes 42714011
chr18 55872938 55872948 MNX1 JASPAR yes 42714012
chr18 55872938 55872948 POU6F1 JASPAR yes 42714013
chr18 55872938 55872948 EMX1 JASPAR yes 110926196
chr18 55872938 55872948 EMX2 JASPAR yes 110926197
chr18 55872938 55872948 GBX2 JASPAR yes 110926198
chr18 55872938 55872948 HOXB2 JASPAR yes 110926199
chr18 55872938 55872948 HOXB3 JASPAR yes 110926200
chr18 55872938 55872948 LHX6 JASPAR yes 110926201
chr18 55872938 55872948 MEOX1 JASPAR yes 110926202
chr18 55872938 55872948 MEOX2 JASPAR yes 110926203
chr18 55872938 55872948 MNX1 JASPAR yes 110926204
chr18 55872938 55872948 POU6F1 JASPAR yes 110926205
chr18 55872938 55872949 HOXA10 JASPAR yes 42714014
chr18 55872938 55872949 HOXA10 JASPAR yes 110926206
chr18 55872939 55872947 LMX1A JASPAR yes 42714015
chr18 55872939 55872947 LMX1B JASPAR yes 42714016
chr18 55872939 55872947 NKX6-1 JASPAR yes 42714017
chr18 55872939 55872947 NKX6-2 JASPAR yes 42714018
chr18 55872939 55872947 PDX1 JASPAR yes 42714019
chr18 55872939 55872947 VAX1 JASPAR yes 42714020
chr18 55872939 55872947 VAX2 JASPAR yes 42714021
chr18 55872939 55872947 VSX1 JASPAR yes 42714022
chr18 55872939 55872947 LMX1A JASPAR yes 110926207
chr18 55872939 55872947 LMX1B JASPAR yes 110926208
chr18 55872939 55872947 NKX6-1 JASPAR yes 110926209
chr18 55872939 55872947 NKX6-2 JASPAR yes 110926210
chr18 55872939 55872947 PDX1 JASPAR yes 110926211
chr18 55872939 55872947 VAX1 JASPAR yes 110926212
chr18 55872939 55872947 VAX2 JASPAR yes 110926213
chr18 55872939 55872947 VSX1 JASPAR yes 110926214
chr18 55872942 55872953 CEBPB JASPAR yes 42714023
chr18 55872942 55872953 CEBPB JASPAR yes 110926215
chr18 55872954 55872958 YY1 TRANSFAC yes 42714024
chr18 55872954 55872958 YY1 TRANSFAC yes 110926216
chr18 55872958 55872967 SRY JASPAR yes 42714025
chr18 55872958 55872967 SRY JASPAR yes 110926217
chr18 55872962 55872977 FOXP1 JASPAR yes 42714026
chr18 55872962 55872977 FOXP1 JASPAR yes 110926218
chr18 55872963 55872978 FOXP1 JASPAR yes 42714027
chr18 55872963 55872978 FOXP1 JASPAR yes 110926219
chr18 55872963 55872984 IRF1 JASPAR yes 42714028
chr18 55872963 55872984 IRF1 JASPAR yes 110926220
chr18 55872964 55872970 TBP TRANSFAC yes 42714029
chr18 55872964 55872970 TBP TRANSFAC yes 110926221
chr18 55872964 55872979 FOXP1 JASPAR yes 42714030
chr18 55872964 55872979 FOXP1 JASPAR yes 110926222
chr18 55872967 55872982 STAT2 JASPAR yes 42714031
chr18 55872967 55872982 STAT2 JASPAR yes 110926223
chr18 55872985 55873000 PRDM1 JASPAR yes 42714032
chr18 55872985 55873000 PRDM1 JASPAR yes 110926224
chr18 55872993 55873009 ZNF143 JASPAR yes 42714033
chr18 55872993 55873009 ZNF143 JASPAR yes 110926225
chr18 55873024 55873027 MYB TRANSFAC yes 42714034
chr18 55873024 55873027 MYB TRANSFAC yes 110926226
chr18 55873031 55873035 H4TF2 TRANSFAC yes 42714035
chr18 55873031 55873035 H4TF2 TRANSFAC yes 110926227
chr18 55873034 55873049 PRDM1 JASPAR yes 42714036
chr18 55873034 55873049 PRDM1 JASPAR yes 110926228
chr18 55873037 55873058 ZNF263 JASPAR yes 42714037
chr18 55873037 55873058 ZNF263 JASPAR yes 110926229
chr18 55873040 55873051 FLI1 JASPAR yes 42714038
chr18 55873040 55873051 FLI1 JASPAR yes 110926230
chr18 55873041 55873045 YY1 TRANSFAC yes 42714039
chr18 55873041 55873045 YY1 TRANSFAC yes 110926231
chr18 55873042 55873050 FEV JASPAR yes 42714040
chr18 55873042 55873050 FEV JASPAR yes 110926232
chr18 55873042 55873063 IRF1 JASPAR yes 42714041
chr18 55873042 55873063 IRF1 JASPAR yes 110926233
chr18 55873044 55873049 ETS2 TRANSFAC yes 42714042
chr18 55873044 55873049 ETS2 TRANSFAC yes 110926234
chr18 55873080 55873084 NFE TRANSFAC yes 42714043
chr18 55873080 55873084 NFE TRANSFAC yes 110926235
chr18 55873105 55873117 FOXI1 JASPAR yes 42714044
chr18 55873105 55873117 FOXI1 JASPAR yes 110926236
chr18 55873108 55873119 FOXA1 JASPAR yes 42714045
chr18 55873108 55873119 FOXA1 JASPAR yes 110926237
chr18 55873109 55873124 FOXP1 JASPAR yes 42714046
chr18 55873109 55873124 FOXP1 JASPAR yes 110926238
chr18 55873110 55873119 SRY JASPAR yes 42714047
chr18 55873110 55873119 SRY JASPAR yes 110926239
chr18 55873110 55873121 FOXP2 JASPAR yes 42714048
chr18 55873110 55873121 FOXP2 JASPAR yes 110926240
chr18 55873112 55873120 FOXO3 JASPAR yes 42714049
chr18 55873112 55873120 FOXO3 JASPAR yes 110926241
chr18 55873116 55873123 SPIB JASPAR yes 42714050
chr18 55873116 55873123 SPIB JASPAR yes 110926242
chr18 55873157 55873176 CTCF JASPAR yes 42714051
chr18 55873157 55873176 CTCF JASPAR yes 110926243
chr18 55873169 55873181 BHLHE23 JASPAR yes 42714052
chr18 55873169 55873181 BHLHE23 JASPAR yes 110926244
chr18 55873170 55873180 NEUROD2 JASPAR yes 42714053
chr18 55873170 55873180 NEUROD2 JASPAR yes 110926245
chr18 55873176 55873186 SMAD3 JASPAR yes 42714054
chr18 55873176 55873186 SMAD3 JASPAR yes 110926246
chr18 55873179 55873194 HNF4A JASPAR yes 42714055
chr18 55873179 55873194 HNF4A JASPAR yes 110926247
chr18 55873180 55873194 NR2F1 JASPAR yes 42714056
chr18 55873180 55873194 NR2F1 JASPAR yes 110926248
chr18 55873180 55873195 HNF4G JASPAR yes 42714057
chr18 55873180 55873195 HNF4G JASPAR yes 110926249
chr18 55873184 55873190 TCF4 TRANSFAC yes 42714058
chr18 55873184 55873190 TCF4 TRANSFAC yes 110926250
SNP sites on vista27579[chr18:55872819-55873190]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55872955 rs79246360 C A
YY1
5282608
chr18 55872977 rs75374486 A C
FOXP1 IRF1 STAT2
5282609
chr18 55873107 rs57363312 G A
FOXI1
5282610
chr18 55873157 rs11663307 C T
CTCF
5282611
Genes possibly regulated by vista27579[chr18:55872819-55873190]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista27579[chr18:55872819-55873190]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results