EnhancerDB
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  3. vista27584[chr18:55889534-55890049]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27584[chr18:55889534-55890049]
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Tissue distribution of vista27584
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Transcription factor that possibly regulate vista27584[chr18:55889534-55890049]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55889542 55889556 POU4F1 JASPAR yes 42714299
chr18 55889542 55889556 POU4F1 JASPAR yes 110928693
chr18 55889542 55889558 POU4F2 JASPAR yes 42714300
chr18 55889542 55889558 POU4F3 JASPAR yes 42714301
chr18 55889542 55889558 POU4F2 JASPAR yes 110928694
chr18 55889542 55889558 POU4F3 JASPAR yes 110928695
chr18 55889590 55889605 PRDM1 JASPAR yes 42714302
chr18 55889590 55889605 STAT2 JASPAR yes 42714303
chr18 55889590 55889605 PRDM1 JASPAR yes 110928696
chr18 55889590 55889605 STAT2 JASPAR yes 110928697
chr18 55889591 55889605 STAT1 JASPAR yes 42714304
chr18 55889591 55889605 STAT1 JASPAR yes 110928698
chr18 55889604 55889618 JUN JASPAR yes 42714305
chr18 55889604 55889618 JUN JASPAR yes 110928699
chr18 55889606 55889617 BATF JASPAR yes 42714306
chr18 55889606 55889617 BATF JASPAR yes 110928700
chr18 55889607 55889618 JUNB JASPAR yes 42714307
chr18 55889607 55889618 JUNB JASPAR yes 110928701
chr18 55889608 55889619 JUND JASPAR yes 42714308
chr18 55889608 55889619 JUND JASPAR yes 110928702
chr18 55889609 55889618 JDP2 JASPAR yes 42714309
chr18 55889609 55889618 JDP2 JASPAR yes 110928703
chr18 55889610 55889616 JUN TRANSFAC yes 42714310
chr18 55889610 55889616 JUN TRANSFAC yes 110928704
chr18 55889639 55889650 PROP1 JASPAR yes 42714311
chr18 55889639 55889650 PROP1 JASPAR yes 110928705
chr18 55889641 55889651 HOXA13 JASPAR yes 42714312
chr18 55889641 55889651 HOXD13 JASPAR yes 42714313
chr18 55889641 55889651 HOXA13 JASPAR yes 110928706
chr18 55889641 55889651 HOXD13 JASPAR yes 110928707
chr18 55889641 55889652 HOXA10 JASPAR yes 42714314
chr18 55889641 55889652 HOXA10 JASPAR yes 110928708
chr18 55889642 55889651 CDX1 JASPAR yes 42714315
chr18 55889642 55889651 CDX1 JASPAR yes 110928709
chr18 55889642 55889653 CDX2 JASPAR yes 42714316
chr18 55889642 55889653 CDX2 JASPAR yes 110928710
chr18 55889650 55889654 YY1 TRANSFAC yes 42714317
chr18 55889650 55889654 YY1 TRANSFAC yes 110928711
chr18 55889654 55889660 TCF4 TRANSFAC yes 42714318
chr18 55889654 55889660 TCF4 TRANSFAC yes 110928712
chr18 55889659 55889674 FOXP1 JASPAR yes 42714319
chr18 55889659 55889674 FOXP1 JASPAR yes 110928713
chr18 55889659 55889680 IRF1 JASPAR yes 42714320
chr18 55889659 55889680 IRF1 JASPAR yes 110928714
chr18 55889661 55889673 FOXC2 JASPAR yes 42714321
chr18 55889661 55889673 FOXC2 JASPAR yes 110928715
chr18 55889662 55889673 FOXP2 JASPAR yes 42714322
chr18 55889662 55889673 FOXP2 JASPAR yes 110928716
chr18 55889662 55889676 IRF7 JASPAR yes 42714323
chr18 55889662 55889676 IRF7 JASPAR yes 110928717
chr18 55889663 55889677 STAT1 JASPAR yes 42714324
chr18 55889663 55889677 STAT1 JASPAR yes 110928718
chr18 55889663 55889678 STAT2 JASPAR yes 42714325
chr18 55889663 55889678 STAT2 JASPAR yes 110928719
chr18 55889664 55889673 SRY JASPAR yes 42714326
chr18 55889664 55889673 SRY JASPAR yes 110928720
chr18 55889664 55889676 IRF1 JASPAR yes 42714327
chr18 55889664 55889676 IRF1 JASPAR yes 110928721
chr18 55889670 55889682 IRF1 JASPAR yes 42714328
chr18 55889670 55889682 IRF1 JASPAR yes 110928722
chr18 55889670 55889685 HNF4G JASPAR yes 42714329
chr18 55889670 55889685 HNF4G JASPAR yes 110928723
chr18 55889671 55889686 HNF4A JASPAR yes 42714330
chr18 55889671 55889686 HNF4A JASPAR yes 110928724
chr18 55889682 55889700 NR3C1 JASPAR yes 42714331
chr18 55889682 55889700 NR3C1 JASPAR yes 110928725
chr18 55889713 55889731 IRF2 JASPAR yes 42714332
chr18 55889713 55889731 IRF2 JASPAR yes 110928726
chr18 55889716 55889731 STAT2 JASPAR yes 42714333
chr18 55889716 55889731 STAT2 JASPAR yes 110928727
chr18 55889719 55889723 NFE TRANSFAC yes 42714334
chr18 55889719 55889723 NFE TRANSFAC yes 110928728
chr18 55889723 55889727 YY1 TRANSFAC yes 42714335
chr18 55889723 55889727 YY1 TRANSFAC yes 110928729
chr18 55889725 55889736 E2F6 JASPAR yes 42714336
chr18 55889725 55889736 E2F6 JASPAR yes 110928730
chr18 55889725 55889746 ZNF263 JASPAR yes 42714337
chr18 55889725 55889746 ZNF263 JASPAR yes 110928731
chr18 55889734 55889742 EHF JASPAR yes 42714338
chr18 55889734 55889742 EHF JASPAR yes 110928732
chr18 55889747 55889757 MAX JASPAR yes 42714339
chr18 55889747 55889757 MAX JASPAR yes 110928733
chr18 55889752 55889770 MAFF JASPAR yes 42714340
chr18 55889752 55889770 MAFF JASPAR yes 110928734
chr18 55889754 55889766 POU2F1 JASPAR yes 42714341
chr18 55889754 55889766 POU2F1 JASPAR yes 110928735
chr18 55889754 55889769 MAFK JASPAR yes 42714342
chr18 55889754 55889769 MAFK JASPAR yes 110928736
chr18 55889759 55889774 HNF1A JASPAR yes 42714343
chr18 55889759 55889774 HNF1A JASPAR yes 110928737
chr18 55889760 55889773 HNF1B JASPAR yes 42714344
chr18 55889760 55889773 HNF1B JASPAR yes 110928738
chr18 55889760 55889774 POU4F1 JASPAR yes 42714345
chr18 55889760 55889774 POU4F1 JASPAR yes 110928739
chr18 55889761 55889773 HNF1B JASPAR yes 42714346
chr18 55889761 55889773 HNF1B JASPAR yes 110928740
chr18 55889765 55889777 POU3F2 JASPAR yes 42714347
chr18 55889765 55889777 POU3F2 JASPAR yes 110928741
chr18 55889769 55889772 MYB TRANSFAC yes 42714348
chr18 55889769 55889772 MYB TRANSFAC yes 110928742
chr18 55889770 55889781 USF2 JASPAR yes 42714349
chr18 55889770 55889781 USF2 JASPAR yes 110928743
chr18 55889771 55889781 MAX JASPAR yes 42714350
chr18 55889771 55889781 MAX JASPAR yes 110928744
chr18 55889773 55889794 IRF1 JASPAR yes 42714351
chr18 55889773 55889794 IRF1 JASPAR yes 110928745
chr18 55889780 55889786 TCF4 TRANSFAC yes 42714352
chr18 55889780 55889786 TCF4 TRANSFAC yes 110928746
chr18 55889784 55889799 FOXP1 JASPAR yes 42714353
chr18 55889784 55889799 FOXP1 JASPAR yes 110928747
chr18 55889793 55889797 NFE TRANSFAC yes 42714354
chr18 55889793 55889797 NFE TRANSFAC yes 110928748
chr18 55889799 55889803 YY1 TRANSFAC yes 42714355
chr18 55889799 55889803 YY1 TRANSFAC yes 110928749
chr18 55889803 55889817 JUN JASPAR yes 42714356
chr18 55889803 55889817 JUN JASPAR yes 110928750
chr18 55889806 55889817 FOSL2 JASPAR yes 42714357
chr18 55889806 55889817 JUNB JASPAR yes 42714358
chr18 55889806 55889817 FOSL2 JASPAR yes 110928751
chr18 55889806 55889817 JUNB JASPAR yes 110928752
chr18 55889807 55889818 FOS JASPAR yes 42714359
chr18 55889807 55889818 JUND JASPAR yes 42714360
chr18 55889807 55889818 FOS JASPAR yes 110928753
chr18 55889807 55889818 JUND JASPAR yes 110928754
chr18 55889809 55889820 BATF JASPAR yes 42714361
chr18 55889809 55889820 BATF JASPAR yes 110928755
chr18 55889812 55889819 TBP TRANSFAC yes 42714362
chr18 55889812 55889819 TFIID TRANSFAC yes 42714363
chr18 55889812 55889819 TBP TRANSFAC yes 110928756
chr18 55889812 55889819 TFIID TRANSFAC yes 110928757
chr18 55889822 55889832 HMBOX1 JASPAR yes 42714364
chr18 55889822 55889832 HMBOX1 JASPAR yes 110928758
chr18 55889827 55889839 GRHL1 JASPAR yes 42714365
chr18 55889827 55889839 GRHL1 JASPAR yes 110928759
chr18 55889828 55889831 MYB TRANSFAC yes 42714366
chr18 55889828 55889831 MYB TRANSFAC yes 110928760
chr18 55889839 55889850 DMRT3 JASPAR yes 42714367
chr18 55889839 55889850 DMRT3 JASPAR yes 110928761
chr18 55889843 55889848 GATA2 JASPAR yes 42714368
chr18 55889843 55889848 GATA2 JASPAR yes 110928762
chr18 55889843 55889855 TAL1 JASPAR yes 42714369
chr18 55889843 55889855 TAL1 JASPAR yes 110928763
chr18 55889844 55889856 BHLHE23 JASPAR yes 42714370
chr18 55889844 55889856 BHLHE23 JASPAR yes 110928764
chr18 55889845 55889855 BHLHE22 JASPAR yes 42714371
chr18 55889845 55889855 NEUROD2 JASPAR yes 42714372
chr18 55889845 55889855 OLIG1 JASPAR yes 42714373
chr18 55889845 55889855 OLIG2 JASPAR yes 42714374
chr18 55889845 55889855 OLIG3 JASPAR yes 42714375
chr18 55889845 55889855 BHLHE22 JASPAR yes 110928765
chr18 55889845 55889855 NEUROD2 JASPAR yes 110928766
chr18 55889845 55889855 OLIG1 JASPAR yes 110928767
chr18 55889845 55889855 OLIG2 JASPAR yes 110928768
chr18 55889845 55889855 OLIG3 JASPAR yes 110928769
chr18 55889845 55889857 TAL1 JASPAR yes 42714376
chr18 55889845 55889857 TAL1 JASPAR yes 110928770
chr18 55889846 55889858 SRF JASPAR yes 42714377
chr18 55889846 55889858 SRF JASPAR yes 110928771
chr18 55889851 55889861 NFIA JASPAR yes 42714378
chr18 55889851 55889861 NFIA JASPAR yes 110928772
chr18 55889853 55889859 NFIC JASPAR yes 42714379
chr18 55889853 55889859 NFIC JASPAR yes 110928773
chr18 55889859 55889874 MEF2C JASPAR yes 42714380
chr18 55889859 55889874 MEF2C JASPAR yes 110928774
chr18 55889860 55889875 MEF2A JASPAR yes 42714381
chr18 55889860 55889875 MEF2A JASPAR yes 110928775
chr18 55889885 55889893 TBX5 JASPAR yes 42714382
chr18 55889885 55889893 TBX5 JASPAR yes 110928776
chr18 55889896 55889907 HOXC13 JASPAR yes 42714383
chr18 55889896 55889907 HOXC13 JASPAR yes 110928777
chr18 55889897 55889907 EMX1 JASPAR yes 42714384
chr18 55889897 55889907 EMX1 JASPAR yes 110928778
chr18 55889898 55889906 NKX6-1 JASPAR yes 42714385
chr18 55889898 55889906 NKX6-2 JASPAR yes 42714386
chr18 55889898 55889906 NKX6-1 JASPAR yes 110928779
chr18 55889898 55889906 NKX6-2 JASPAR yes 110928780
chr18 55889898 55889908 POU6F2 JASPAR yes 42714387
chr18 55889898 55889908 POU6F2 JASPAR yes 110928781
chr18 55889926 55889930 YY1 TRANSFAC yes 42714388
chr18 55889926 55889930 YY1 TRANSFAC yes 110928782
chr18 55889928 55889941 JUN JASPAR yes 42714389
chr18 55889928 55889941 JUN JASPAR yes 110928783
chr18 55889929 55889943 BATF3 JASPAR yes 42714390
chr18 55889929 55889943 BATF3 JASPAR yes 110928784
chr18 55889930 55889942 JDP2 JASPAR yes 42714391
chr18 55889930 55889942 JDP2 JASPAR yes 110928785
chr18 55889930 55889945 JUND JASPAR yes 42714392
chr18 55889930 55889945 JUND JASPAR yes 110928786
chr18 55889936 55889944 NKX6-1 JASPAR yes 42714393
chr18 55889936 55889944 NKX6-1 JASPAR yes 110928787
chr18 55889936 55889946 HOXC10 JASPAR yes 42714394
chr18 55889936 55889946 HOXC10 JASPAR yes 110928788
chr18 55889938 55889942 YY1 TRANSFAC yes 42714395
chr18 55889938 55889942 YY1 TRANSFAC yes 110928789
chr18 55889940 55889948 ISL2 JASPAR yes 42714396
chr18 55889940 55889948 ISL2 JASPAR yes 110928790
chr18 55889940 55889949 NKX3-2 JASPAR yes 42714397
chr18 55889940 55889949 NKX3-2 JASPAR yes 110928791
chr18 55889941 55889952 TBX20 JASPAR yes 42714398
chr18 55889941 55889952 TBX20 JASPAR yes 110928792
chr18 55889942 55889952 TBR1 JASPAR yes 42714399
chr18 55889942 55889952 TBR1 JASPAR yes 110928793
chr18 55889948 55889960 YY1 JASPAR yes 42714400
chr18 55889948 55889960 YY1 JASPAR yes 110928794
chr18 55889951 55889957 YY1 JASPAR yes 42714401
chr18 55889951 55889957 YY1 JASPAR yes 110928795
chr18 55889968 55889979 CDX2 JASPAR yes 42714402
chr18 55889968 55889979 CDX2 JASPAR yes 110928796
chr18 55889969 55889980 HOXA10 JASPAR yes 42714403
chr18 55889969 55889980 HOXA10 JASPAR yes 110928797
chr18 55889970 55889979 CDX1 JASPAR yes 42714404
chr18 55889970 55889979 CDX1 JASPAR yes 110928798
chr18 55889970 55889980 HOXA13 JASPAR yes 42714405
chr18 55889970 55889980 HOXB13 JASPAR yes 42714406
chr18 55889970 55889980 HOXD13 JASPAR yes 42714407
chr18 55889970 55889980 HOXA13 JASPAR yes 110928799
chr18 55889970 55889980 HOXB13 JASPAR yes 110928800
chr18 55889970 55889980 HOXD13 JASPAR yes 110928801
chr18 55889978 55889989 DMRT3 JASPAR yes 42714408
chr18 55889978 55889989 DMRT3 JASPAR yes 110928802
chr18 55889980 55889991 FOXC1 JASPAR yes 42714409
chr18 55889980 55889991 FOXC1 JASPAR yes 110928803
chr18 55889980 55889992 FOXC2 JASPAR yes 42714410
chr18 55889980 55889992 FOXC2 JASPAR yes 110928804
chr18 55889986 55890002 SOX8 JASPAR yes 42714411
chr18 55889986 55890002 SOX8 JASPAR yes 110928805
chr18 55889995 55890009 TCF7L2 JASPAR yes 42714412
chr18 55889995 55890009 TCF7L2 JASPAR yes 110928806
chr18 55889995 55890010 LEF1 JASPAR yes 42714413
chr18 55889995 55890010 LEF1 JASPAR yes 110928807
chr18 55890022 55890037 HNF1A JASPAR yes 42714414
chr18 55890022 55890037 HNF1A JASPAR yes 110928808
chr18 55890034 55890041 NKX3-1 JASPAR yes 42714415
chr18 55890034 55890041 NKX3-1 JASPAR yes 110928809
chr18 55890039 55890043 YY1 TRANSFAC yes 42714416
chr18 55890039 55890043 YY1 TRANSFAC yes 110928810
chr18 55890047 55890062 HNF1A JASPAR yes 42714417
chr18 55890047 55890062 HNF1A JASPAR yes 110928811
SNP sites on vista27584[chr18:55889534-55890049]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55889815 rs138681976 C T
BATF FOS FOSL2 JUN JUNB JUND TBP TFIID
5282862
chr18 55889958 rs564780892 C A,T
YY1
5282863
chr18 55889982 rs58534706 G A
DMRT3 FOXC1 FOXC2
5282864
Genes possibly regulated by vista27584[chr18:55889534-55890049]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27584[chr18:55889534-55890049]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr18 56118356 56118377 + hsa-miR-122-3p MIMAT0004590 56113494 0.01063869779331604 0.941607 0.66199 790
Expression level of miRNAs
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