EnhancerDB
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  3. vista27586[chr18:55892299-55892691]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27586[chr18:55892299-55892691]
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Tissue distribution of vista27586
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Transcription factor that possibly regulate vista27586[chr18:55892299-55892691]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55892318 55892555 EBF1 UCSC Txn Factor no Conserved 108338231
chr18 55892295 55892305 NFATC3 JASPAR yes 42714533
chr18 55892295 55892305 NFATC3 JASPAR yes 110929262
chr18 55892297 55892304 NFATC2 JASPAR yes 42714534
chr18 55892297 55892304 NFATC2 JASPAR yes 110929263
chr18 55892297 55892312 STAT2 JASPAR yes 42714535
chr18 55892297 55892312 STAT2 JASPAR yes 110929264
chr18 55892324 55892335 CEBPA JASPAR yes 42714536
chr18 55892324 55892335 CEBPA JASPAR yes 110929265
chr18 55892325 55892336 CEBPB JASPAR yes 42714537
chr18 55892325 55892336 CEBPB JASPAR yes 110929266
chr18 55892328 55892334 TCF4 TRANSFAC yes 42714538
chr18 55892328 55892334 TCF4 TRANSFAC yes 110929267
chr18 55892339 55892354 HNF4G JASPAR yes 42714539
chr18 55892339 55892354 HNF4G JASPAR yes 110929268
chr18 55892340 55892355 HNF4A JASPAR yes 42714540
chr18 55892340 55892355 HNF4A JASPAR yes 110929269
chr18 55892351 55892366 PRDM1 JASPAR yes 42714541
chr18 55892351 55892366 PRDM1 JASPAR yes 110929270
chr18 55892366 55892380 E2F7 JASPAR yes 42714542
chr18 55892366 55892380 E2F7 JASPAR yes 110929271
chr18 55892367 55892377 ZNF740 JASPAR yes 42714543
chr18 55892367 55892377 ZNF740 JASPAR yes 110929272
chr18 55892368 55892378 ZNF740 JASPAR yes 42714544
chr18 55892368 55892378 ZNF740 JASPAR yes 110929273
chr18 55892368 55892380 E2F8 JASPAR yes 42714545
chr18 55892368 55892380 E2F8 JASPAR yes 110929274
chr18 55892369 55892390 ZNF263 JASPAR yes 42714546
chr18 55892369 55892390 ZNF263 JASPAR yes 110929275
chr18 55892372 55892393 ZNF263 JASPAR yes 42714547
chr18 55892372 55892393 ZNF263 JASPAR yes 110929276
chr18 55892374 55892379 ETS2 TRANSFAC yes 42714548
chr18 55892374 55892379 ETS2 TRANSFAC yes 110929277
chr18 55892403 55892421 ESR1 JASPAR yes 42714549
chr18 55892403 55892421 ESR1 JASPAR yes 110929278
chr18 55892404 55892419 ESR2 JASPAR yes 42714550
chr18 55892404 55892419 ESR2 JASPAR yes 110929279
chr18 55892409 55892417 MEIS3 JASPAR yes 42714551
chr18 55892409 55892417 MEIS3 JASPAR yes 110929280
chr18 55892410 55892414 NFE TRANSFAC yes 42714552
chr18 55892410 55892414 NFE TRANSFAC yes 110929281
chr18 55892428 55892449 REST JASPAR yes 42714553
chr18 55892428 55892449 REST JASPAR yes 110929282
chr18 55892429 55892448 REST JASPAR yes 42714554
chr18 55892429 55892448 REST JASPAR yes 110929283
chr18 55892432 55892436 H4TF2 TRANSFAC yes 42714555
chr18 55892432 55892436 H4TF2 TRANSFAC yes 110929284
chr18 55892432 55892446 EBF1 JASPAR yes 42714556
chr18 55892432 55892446 EBF1 JASPAR yes 110929285
chr18 55892434 55892445 EBF1 JASPAR yes 42714557
chr18 55892434 55892445 EBF1 JASPAR yes 110929286
chr18 55892443 55892456 ATF4 JASPAR yes 42714558
chr18 55892443 55892456 ATF4 JASPAR yes 110929287
chr18 55892446 55892457 DUX4 JASPAR yes 42714559
chr18 55892446 55892457 DUX4 JASPAR yes 110929288
chr18 55892451 55892455 YY1 TRANSFAC yes 42714560
chr18 55892451 55892455 YY1 TRANSFAC yes 110929289
chr18 55892455 55892460 GATA2 JASPAR yes 42714561
chr18 55892455 55892460 GATA2 JASPAR yes 110929290
chr18 55892474 55892485 HOXA10 JASPAR yes 42714562
chr18 55892474 55892485 HOXA10 JASPAR yes 110929291
chr18 55892475 55892485 HOXD13 JASPAR yes 42714563
chr18 55892475 55892485 HOXD13 JASPAR yes 110929292
chr18 55892477 55892481 YY1 TRANSFAC yes 42714564
chr18 55892477 55892481 YY1 TRANSFAC yes 110929293
chr18 55892500 55892521 IRF1 JASPAR yes 42714565
chr18 55892500 55892521 IRF1 JASPAR yes 110929294
chr18 55892502 55892517 IRF9 JASPAR yes 42714566
chr18 55892502 55892517 IRF9 JASPAR yes 110929295
chr18 55892504 55892518 STAT1 JASPAR yes 42714567
chr18 55892504 55892518 STAT1 JASPAR yes 110929296
chr18 55892504 55892519 STAT2 JASPAR yes 42714568
chr18 55892504 55892519 STAT2 JASPAR yes 110929297
chr18 55892505 55892517 IRF1 JASPAR yes 42714569
chr18 55892505 55892517 IRF1 JASPAR yes 110929298
chr18 55892512 55892527 LEF1 JASPAR yes 42714570
chr18 55892512 55892527 LEF1 JASPAR yes 110929299
chr18 55892513 55892527 TCF7L2 JASPAR yes 42714571
chr18 55892513 55892527 TCF7L2 JASPAR yes 110929300
chr18 55892513 55892531 MAFF JASPAR yes 42714572
chr18 55892513 55892531 MAFF JASPAR yes 110929301
chr18 55892516 55892522 LEF1 TRANSFAC yes 42714573
chr18 55892516 55892522 TCF4 TRANSFAC yes 42714574
chr18 55892516 55892522 LEF1 TRANSFAC yes 110929302
chr18 55892516 55892522 TCF4 TRANSFAC yes 110929303
chr18 55892521 55892532 NFE2L2 JASPAR yes 42714575
chr18 55892521 55892532 NFE2L2 JASPAR yes 110929304
chr18 55892524 55892530 SOX10 JASPAR yes 42714576
chr18 55892524 55892530 SOX10 JASPAR yes 110929305
chr18 55892540 55892551 CEBPA JASPAR yes 42714577
chr18 55892540 55892551 CEBPA JASPAR yes 110929306
chr18 55892541 55892552 CEBPB JASPAR yes 42714578
chr18 55892541 55892552 CEBPB JASPAR yes 110929307
chr18 55892550 55892553 MYB TRANSFAC yes 42714579
chr18 55892550 55892553 MYB TRANSFAC yes 110929308
chr18 55892567 55892579 INSM1 JASPAR yes 42714580
chr18 55892567 55892579 INSM1 JASPAR yes 110929309
chr18 55892602 55892614 GLI2 JASPAR yes 42714581
chr18 55892602 55892614 GLI2 JASPAR yes 110929310
chr18 55892606 55892616 SP1 JASPAR yes 42714582
chr18 55892606 55892616 SP1 JASPAR yes 110929311
chr18 55892607 55892617 SP1 JASPAR yes 42714583
chr18 55892607 55892617 SP1 JASPAR yes 110929312
chr18 55892608 55892613 SP1 TRANSFAC yes 42714584
chr18 55892608 55892613 SP1 TRANSFAC yes 110929313
chr18 55892608 55892619 E2F4 JASPAR yes 42714585
chr18 55892608 55892619 E2F4 JASPAR yes 110929314
chr18 55892609 55892614 SP1 TRANSFAC yes 42714586
chr18 55892609 55892614 SP1 TRANSFAC yes 110929315
chr18 55892609 55892615 SP1 TRANSFAC yes 42714587
chr18 55892609 55892615 SP1 TRANSFAC yes 110929316
chr18 55892611 55892624 NFKB1 JASPAR yes 42714588
chr18 55892611 55892624 NFKB1 JASPAR yes 110929317
chr18 55892613 55892630 NR3C1 JASPAR yes 42714589
chr18 55892613 55892630 NR3C2 JASPAR yes 42714590
chr18 55892613 55892630 NR3C1 JASPAR yes 110929318
chr18 55892613 55892630 NR3C2 JASPAR yes 110929319
chr18 55892622 55892626 NFE TRANSFAC yes 42714591
chr18 55892622 55892626 NFE TRANSFAC yes 110929320
chr18 55892623 55892630 E2F1 TRANSFAC yes 42714592
chr18 55892623 55892630 E2F1 TRANSFAC yes 110929321
chr18 55892628 55892639 TFAP2A JASPAR yes 42714593
chr18 55892628 55892639 TFAP2B JASPAR yes 42714594
chr18 55892628 55892639 TFAP2C JASPAR yes 42714595
chr18 55892628 55892639 TFAP2A JASPAR yes 110929322
chr18 55892628 55892639 TFAP2B JASPAR yes 110929323
chr18 55892628 55892639 TFAP2C JASPAR yes 110929324
chr18 55892634 55892638 LFA1 TRANSFAC yes 42714596
chr18 55892634 55892638 LFA1 TRANSFAC yes 110929325
chr18 55892640 55892651 NFKB1 JASPAR yes 42714597
chr18 55892640 55892651 NFKB1 JASPAR yes 110929326
chr18 55892680 55892685 GATA2 JASPAR yes 42714598
chr18 55892680 55892685 GATA2 JASPAR yes 110929327
chr18 55892686 55892697 TBX20 JASPAR yes 42714599
chr18 55892686 55892697 TBX20 JASPAR yes 110929328
chr18 55892689 55892699 GSX2 JASPAR yes 42714600
chr18 55892689 55892699 GSX2 JASPAR yes 110929329
chr18 55892690 55892698 BARX1 JASPAR yes 42714601
chr18 55892690 55892698 BARX1 JASPAR yes 110929330
chr18 55892691 55892702 PHOX2A JASPAR yes 42714602
chr18 55892691 55892702 PROP1 JASPAR yes 42714603
chr18 55892691 55892702 PHOX2A JASPAR yes 110929331
chr18 55892691 55892702 PROP1 JASPAR yes 110929332
SNP sites on vista27586[chr18:55892299-55892691]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55892311 rs292451 C A
STAT2
5282894
chr18 55892399 rs138902493 A G
EBF1
5282895
chr18 55892676 rs527476543 G T no 5282896
chr18 55892677 rs552087473 G C no 5282897
Genes possibly regulated by vista27586[chr18:55892299-55892691]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27586[chr18:55892299-55892691]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr18 56118356 56118377 + hsa-miR-122-3p MIMAT0004590 56113494 0.010767464397538994 0.941607 0.66199 790
Expression level of miRNAs
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