EnhancerDB
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  3. vista27587[chr18:55893671-55893850]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27587[chr18:55893671-55893850]
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Tissue distribution of vista27587
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Transcription factor that possibly regulate vista27587[chr18:55893671-55893850]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55893657 55893671 ONECUT1 JASPAR yes 42714604
chr18 55893657 55893671 ONECUT2 JASPAR yes 42714605
chr18 55893657 55893671 ONECUT3 JASPAR yes 42714606
chr18 55893657 55893671 ONECUT1 JASPAR yes 110929469
chr18 55893657 55893671 ONECUT2 JASPAR yes 110929470
chr18 55893657 55893671 ONECUT3 JASPAR yes 110929471
chr18 55893671 55893683 PBX1 JASPAR yes 42714607
chr18 55893671 55893683 PBX1 JASPAR yes 110929476
chr18 55893700 55893711 CEBPA JASPAR yes 42714608
chr18 55893700 55893711 CEBPA JASPAR yes 110929477
chr18 55893715 55893720 GATA2 JASPAR yes 42714609
chr18 55893715 55893720 GATA2 JASPAR yes 110929478
chr18 55893725 55893735 MZF1 JASPAR yes 42714610
chr18 55893725 55893735 MZF1 JASPAR yes 110929479
chr18 55893728 55893738 SP1 JASPAR yes 42714611
chr18 55893728 55893738 SP1 JASPAR yes 110929480
chr18 55893730 55893736 MAZ TRANSFAC yes 42714612
chr18 55893730 55893736 MAZ TRANSFAC yes 110929481
chr18 55893738 55893756 IRF2 JASPAR yes 42714613
chr18 55893738 55893756 IRF2 JASPAR yes 110929482
chr18 55893767 55893782 JUND JASPAR yes 42714614
chr18 55893767 55893782 JUND JASPAR yes 110929483
chr18 55893786 55893800 SPI1 JASPAR yes 42714615
chr18 55893786 55893800 SPIC JASPAR yes 42714616
chr18 55893786 55893800 SPI1 JASPAR yes 110929484
chr18 55893786 55893800 SPIC JASPAR yes 110929485
chr18 55893787 55893794 SPI1 JASPAR yes 42714617
chr18 55893787 55893794 SPI1 JASPAR yes 110929486
chr18 55893812 55893816 NFE TRANSFAC yes 42714618
chr18 55893812 55893816 NFE TRANSFAC yes 110929487
chr18 55893840 55893858 RARA JASPAR yes 42714619
chr18 55893840 55893858 RARA JASPAR yes 110929488
chr18 55893842 55893846 LFA1 TRANSFAC yes 42714620
chr18 55893842 55893846 LFA1 TRANSFAC yes 110929489
SNP sites on vista27587[chr18:55893671-55893850]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55893785 rs144440798 A G no 5282904
chr18 55893826 rs111844560 G A no 5282905
chr18 55893829 rs12457076 T G no 5282906
Genes possibly regulated by vista27587[chr18:55893671-55893850]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27587[chr18:55893671-55893850]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr18 56118356 56118377 + hsa-miR-122-3p MIMAT0004590 56113494 0.010828781013732362 0.941607 0.66199 790
Expression level of miRNAs
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