EnhancerDB
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  3. vista27589[chr18:55929917-55930363]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27589[chr18:55929917-55930363]
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Tissue distribution of vista27589
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Transcription factor that possibly regulate vista27589[chr18:55929917-55930363]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55929915 55929930 AR JASPAR yes 42714679
chr18 55929915 55929930 AR JASPAR yes 110933510
chr18 55929973 55929978 ETS2 TRANSFAC yes 42714680
chr18 55929973 55929978 ETS2 TRANSFAC yes 110933511
chr18 55929989 55929994 GATA2 JASPAR yes 42714681
chr18 55929989 55929994 GATA2 JASPAR yes 110933512
chr18 55930002 55930016 JUN JASPAR yes 42714682
chr18 55930002 55930016 JUN JASPAR yes 110933513
chr18 55930002 55930017 HNF1A JASPAR yes 42714683
chr18 55930002 55930017 HNF1A JASPAR yes 110933514
chr18 55930003 55930016 HNF1B JASPAR yes 42714684
chr18 55930003 55930016 HNF1B JASPAR yes 110933515
chr18 55930004 55930015 BATF JASPAR yes 42714685
chr18 55930004 55930015 BATF JASPAR yes 110933516
chr18 55930006 55930017 FOS JASPAR yes 42714686
chr18 55930006 55930017 FOS JASPAR yes 110933517
chr18 55930008 55930014 JUN TRANSFAC yes 42714687
chr18 55930008 55930014 JUN TRANSFAC yes 110933518
chr18 55930012 55930015 MYB TRANSFAC yes 42714688
chr18 55930012 55930015 MYB TRANSFAC yes 110933519
chr18 55930023 55930032 SNAI2 JASPAR yes 42714689
chr18 55930023 55930032 SNAI2 JASPAR yes 110933520
chr18 55930023 55930033 ID4 JASPAR yes 42714690
chr18 55930023 55930033 ID4 JASPAR yes 110933521
chr18 55930028 55930038 SREBF1 JASPAR yes 42714691
chr18 55930028 55930038 SREBF2 JASPAR yes 42714692
chr18 55930028 55930038 SREBF1 JASPAR yes 110933522
chr18 55930028 55930038 SREBF2 JASPAR yes 110933523
chr18 55930066 55930083 PAX9 JASPAR yes 42714693
chr18 55930066 55930083 PAX9 JASPAR yes 110933524
chr18 55930074 55930088 TLX1 JASPAR yes 42714694
chr18 55930074 55930088 TLX1 JASPAR yes 110933525
chr18 55930098 55930102 LFA1 TRANSFAC yes 42714695
chr18 55930098 55930102 LFA1 TRANSFAC yes 110933526
chr18 55930109 55930126 BCL6B JASPAR yes 42714696
chr18 55930109 55930126 BCL6B JASPAR yes 110933527
chr18 55930124 55930142 TP73 JASPAR yes 42714697
chr18 55930124 55930142 TP73 JASPAR yes 110933528
chr18 55930126 55930141 TP53 JASPAR yes 42714698
chr18 55930126 55930141 TP53 JASPAR yes 110933529
chr18 55930132 55930139 MEIS1 JASPAR yes 42714699
chr18 55930132 55930139 MEIS1 JASPAR yes 110933530
chr18 55930132 55930140 MEIS2 JASPAR yes 42714700
chr18 55930132 55930140 MEIS3 JASPAR yes 42714701
chr18 55930132 55930140 MEIS2 JASPAR yes 110933531
chr18 55930132 55930140 MEIS3 JASPAR yes 110933532
chr18 55930135 55930145 GABPA JASPAR yes 42714702
chr18 55930135 55930145 GABPA JASPAR yes 110933533
chr18 55930135 55930146 FLI1 JASPAR yes 42714703
chr18 55930135 55930146 FLI1 JASPAR yes 110933534
chr18 55930155 55930167 YY1 JASPAR yes 42714704
chr18 55930155 55930167 YY1 JASPAR yes 110933535
chr18 55930179 55930183 YY1 TRANSFAC yes 42714705
chr18 55930179 55930183 YY1 TRANSFAC yes 110933536
chr18 55930180 55930191 STAT3 JASPAR yes 42714706
chr18 55930180 55930191 STAT3 JASPAR yes 110933537
chr18 55930214 55930235 REST JASPAR yes 42714707
chr18 55930214 55930235 REST JASPAR yes 110933538
chr18 55930251 55930264 DUXA JASPAR yes 42714708
chr18 55930251 55930264 DUXA JASPAR yes 110933539
chr18 55930252 55930263 DUX4 JASPAR yes 42714709
chr18 55930252 55930263 DUX4 JASPAR yes 110933540
chr18 55930276 55930280 ESR1 TRANSFAC yes 42714710
chr18 55930276 55930280 ESR1 TRANSFAC yes 110933541
chr18 55930321 55930326 SP1 TRANSFAC yes 42714711
chr18 55930321 55930326 SP1 TRANSFAC yes 110933542
chr18 55930327 55930335 GATA1 TRANSFAC yes 42714712
chr18 55930327 55930335 GATA1 TRANSFAC yes 110933543
chr18 55930330 55930334 NFE TRANSFAC yes 42714713
chr18 55930330 55930334 NFE TRANSFAC yes 110933544
chr18 55930330 55930335 GATA1 TRANSFAC yes 42714714
chr18 55930330 55930335 GATA1 TRANSFAC yes 110933545
chr18 55930330 55930336 GATA3 JASPAR yes 42714715
chr18 55930330 55930336 GATA3 JASPAR yes 110933546
SNP sites on vista27589[chr18:55929917-55930363]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55929922 rs531718644 A C
AR
5283251
chr18 55929965 rs1551247 T C no 5283252
chr18 55930060 rs8096649 C A no 5283253
chr18 55930098 rs543901866 C T
LFA1
5283254
chr18 55930187 rs190187796 A G
STAT3
5283255
chr18 55930357 rs112567061 A C no 5283256
Genes possibly regulated by vista27589[chr18:55929917-55930363]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27589[chr18:55929917-55930363]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr18 56118356 56118377 + hsa-miR-122-3p MIMAT0004590 56113494 0.012949539592860661 0.941607 0.66199 790
Expression level of miRNAs
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