EnhancerDB
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  3. vista27592[chr18:56028576-56028863]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27592[chr18:56028576-56028863]
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Tissue distribution of vista27592
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Transcription factor that possibly regulate vista27592[chr18:56028576-56028863]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56028593 56028605 MEF2A JASPAR yes 42714822
chr18 56028593 56028605 MEF2D JASPAR yes 42714823
chr18 56028593 56028605 MEF2A JASPAR yes 110943679
chr18 56028593 56028605 MEF2D JASPAR yes 110943680
chr18 56028604 56028608 YY1 TRANSFAC yes 42714824
chr18 56028604 56028608 YY1 TRANSFAC yes 110943681
chr18 56028607 56028619 HNF1B JASPAR yes 42714825
chr18 56028607 56028619 HNF1B JASPAR yes 110943682
chr18 56028613 56028633 TP63 JASPAR yes 42714826
chr18 56028613 56028633 TP63 JASPAR yes 110943683
chr18 56028614 56028632 TP73 JASPAR yes 42714827
chr18 56028614 56028632 TP73 JASPAR yes 110943684
chr18 56028617 56028630 EOMES JASPAR yes 42714828
chr18 56028617 56028630 EOMES JASPAR yes 110943685
chr18 56028619 56028629 TBR1 JASPAR yes 42714829
chr18 56028619 56028629 TBR1 JASPAR yes 110943686
chr18 56028620 56028630 TBX21 JASPAR yes 42714830
chr18 56028620 56028630 TBX21 JASPAR yes 110943687
chr18 56028628 56028642 BATF3 JASPAR yes 42714831
chr18 56028628 56028642 BATF3 JASPAR yes 110943688
chr18 56028632 56028640 MEIS2 JASPAR yes 42714832
chr18 56028632 56028640 MEIS3 JASPAR yes 42714833
chr18 56028632 56028640 MEIS2 JASPAR yes 110943689
chr18 56028632 56028640 MEIS3 JASPAR yes 110943690
chr18 56028633 56028637 NFE TRANSFAC yes 42714834
chr18 56028633 56028637 NFE TRANSFAC yes 110943691
chr18 56028641 56028657 SOX8 JASPAR yes 42714835
chr18 56028641 56028657 SOX8 JASPAR yes 110943692
chr18 56028645 56028649 NFE TRANSFAC yes 42714836
chr18 56028645 56028649 NFE TRANSFAC yes 110943693
chr18 56028645 56028650 GATA1 TRANSFAC yes 42714837
chr18 56028645 56028650 GATA1 TRANSFAC yes 110943694
chr18 56028645 56028651 GATA3 JASPAR yes 42714838
chr18 56028645 56028651 GATA3 JASPAR yes 110943695
chr18 56028653 56028664 CEBPA JASPAR yes 42714839
chr18 56028653 56028664 CEBPA JASPAR yes 110943696
chr18 56028653 56028665 DBP JASPAR yes 42714840
chr18 56028653 56028665 HLF JASPAR yes 42714841
chr18 56028653 56028665 TEF JASPAR yes 42714842
chr18 56028653 56028665 DBP JASPAR yes 110943697
chr18 56028653 56028665 HLF JASPAR yes 110943698
chr18 56028653 56028665 TEF JASPAR yes 110943699
chr18 56028654 56028664 CEBPB JASPAR yes 42714843
chr18 56028654 56028664 CEBPD JASPAR yes 42714844
chr18 56028654 56028664 CEBPE JASPAR yes 42714845
chr18 56028654 56028664 CEBPG JASPAR yes 42714846
chr18 56028654 56028664 CEBPB JASPAR yes 110943700
chr18 56028654 56028664 CEBPD JASPAR yes 110943701
chr18 56028654 56028664 CEBPE JASPAR yes 110943702
chr18 56028654 56028664 CEBPG JASPAR yes 110943703
chr18 56028655 56028663 NF-IL6 TRANSFAC yes 42714847
chr18 56028655 56028663 NF-IL6 TRANSFAC yes 110943704
chr18 56028659 56028677 IRF2 JASPAR yes 42714848
chr18 56028659 56028677 IRF2 JASPAR yes 110943705
chr18 56028660 56028663 MYB TRANSFAC yes 42714849
chr18 56028660 56028663 MYB TRANSFAC yes 110943706
chr18 56028660 56028676 SOX4 JASPAR yes 42714850
chr18 56028660 56028676 SOX4 JASPAR yes 110943707
chr18 56028660 56028681 IRF1 JASPAR yes 42714851
chr18 56028660 56028681 IRF1 JASPAR yes 110943708
chr18 56028661 56028676 LEF1 JASPAR yes 42714852
chr18 56028661 56028676 SOX21 JASPAR yes 42714853
chr18 56028661 56028676 LEF1 JASPAR yes 110943709
chr18 56028661 56028676 SOX21 JASPAR yes 110943710
chr18 56028661 56028677 SOX4 JASPAR yes 42714854
chr18 56028661 56028677 SOX4 JASPAR yes 110943711
chr18 56028662 56028677 PRDM1 JASPAR yes 42714855
chr18 56028662 56028677 STAT2 JASPAR yes 42714856
chr18 56028662 56028677 PRDM1 JASPAR yes 110943712
chr18 56028662 56028677 STAT2 JASPAR yes 110943713
chr18 56028663 56028677 STAT1 JASPAR yes 42714857
chr18 56028663 56028677 STAT1 JASPAR yes 110943714
chr18 56028664 56028676 IRF1 JASPAR yes 42714858
chr18 56028664 56028676 IRF1 JASPAR yes 110943715
chr18 56028664 56028678 IRF7 JASPAR yes 42714859
chr18 56028664 56028678 IRF7 JASPAR yes 110943716
chr18 56028669 56028673 YY1 TRANSFAC yes 42714860
chr18 56028669 56028673 YY1 TRANSFAC yes 110943717
chr18 56028671 56028681 NFATC3 JASPAR yes 42714861
chr18 56028671 56028681 NFATC3 JASPAR yes 110943718
chr18 56028671 56028686 STAT1 JASPAR yes 42714862
chr18 56028671 56028686 STAT1 JASPAR yes 110943719
chr18 56028672 56028679 NFATC2 JASPAR yes 42714863
chr18 56028672 56028679 NFATC2 JASPAR yes 110943720
chr18 56028673 56028684 STAT1 JASPAR yes 42714864
chr18 56028673 56028684 STAT3 JASPAR yes 42714865
chr18 56028673 56028684 STAT1 JASPAR yes 110943721
chr18 56028673 56028684 STAT3 JASPAR yes 110943722
chr18 56028686 56028690 TEAD2 TRANSFAC yes 42714866
chr18 56028686 56028690 TEAD2 TRANSFAC yes 110943723
chr18 56028690 56028700 SREBF1 JASPAR yes 42714867
chr18 56028690 56028700 SREBF1 JASPAR yes 110943724
chr18 56028732 56028736 LFA1 TRANSFAC yes 42714868
chr18 56028732 56028736 LFA1 TRANSFAC yes 110943725
chr18 56028745 56028749 YY1 TRANSFAC yes 42714869
chr18 56028745 56028749 YY1 TRANSFAC yes 110943726
chr18 56028750 56028754 H1TF2 TRANSFAC yes 42714870
chr18 56028750 56028754 NFE TRANSFAC yes 42714871
chr18 56028750 56028754 SRF TRANSFAC yes 42714872
chr18 56028750 56028754 H1TF2 TRANSFAC yes 110943727
chr18 56028750 56028754 NFE TRANSFAC yes 110943728
chr18 56028750 56028754 SRF TRANSFAC yes 110943729
chr18 56028791 56028808 RARA JASPAR yes 42714873
chr18 56028791 56028808 RARA JASPAR yes 110943730
chr18 56028799 56028812 NR2F1 JASPAR yes 42714874
chr18 56028799 56028812 NR2F1 JASPAR yes 110943731
chr18 56028803 56028807 ESR1 TRANSFAC yes 42714875
chr18 56028803 56028807 ESR1 TRANSFAC yes 110943732
chr18 56028856 56028865 HIC2 JASPAR yes 42714876
chr18 56028856 56028865 HIC2 JASPAR yes 110943733
chr18 56028859 56028863 LFA1 TRANSFAC yes 42714877
chr18 56028859 56028863 LFA1 TRANSFAC yes 110943734
SNP sites on vista27592[chr18:56028576-56028863]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56028621 rs8085125 T A,G
EOMES TBR1 TBX21 TP63 TP73
5284164
chr18 56028639 rs111372506 A G
BATF3 MEIS2 MEIS3
5284165
chr18 56028803 rs577575449 G A
ESR1 NR2F1 RARA
5284166
chr18 56028859 rs2075406 C T
HIC2 LFA1
5284167
Genes possibly regulated by vista27592[chr18:56028576-56028863]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista27592[chr18:56028576-56028863]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr18 56118356 56118377 + hsa-miR-122-3p MIMAT0004590 56113494 0.02759217944379764 0.941607 0.66199 790
Expression level of miRNAs
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